Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 Y_RNA.216-201ENST00000364205 93 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 SNORA51.2-201ENST00000364595 132 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 RNU6-317P-201ENST00000384031 107 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 RNU6-878P-201ENST00000384578 110 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 MIR142-201ENST00000384835 87 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 SNRPEP2-201ENST00000397592 279 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AL590290.1-201ENST00000405336 380 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AL356432.1-201ENST00000405809 419 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 RNU4-55P-201ENST00000410731 137 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 ZNF90P2-204ENST00000419323 1075 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AL356583.2-201ENST00000426536 280 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 MTND3P2-201ENST00000438452 342 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 RPL23AP46-201ENST00000438548 490 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 CBX1P4-201ENST00000439415 457 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 IPO7P1-201ENST00000442031 636 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 COX6CP18-201ENST00000448769 222 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC108145.1-201ENST00000503770 153 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC011352.3-201ENST00000505162 593 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 HMGB1P29-201ENST00000505659 499 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 NDUFB4P2-201ENST00000509515 391 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 FTH1P21-201ENST00000512179 511 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 Y_RNA.693-201ENST00000516641 110 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 TRMT10BP1-201ENST00000519377 943 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC007424.1-203ENST00000554613 687 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC025678.1-201ENST00000567861 338 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AL133255.1-201ENST00000606374 441 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC243654.2-201ENST00000612843 443 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AL138721.1-201ENST00000616756 179 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 Y_RNA.86-201ENST00000363020 111 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 RNU6-254P-201ENST00000363377 107 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC073069.1-201ENST00000428657 441 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 SEPT7P5-201ENST00000434048 306 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 PGBD4P3-201ENST00000440731 581 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC006011.1-201ENST00000442758 349 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AL359073.1-201ENST00000448036 403 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC239809.1-201ENST00000450470 217 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC233279.1-201ENST00000455300 423 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC023598.1-201ENST00000472521 361 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC012170.1-201ENST00000495139 359 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC026412.2-201ENST00000512270 1075 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 SNORA18.6-201ENST00000516792 115 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AP002812.4-201ENST00000532139 286 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 RN7SL703P-201ENST00000578485 302 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC007363.1-201ENST00000604736 620 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC103710.1-201ENST00000610003 901 ntBASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SH3RF3Q8TEJ3 AC116667.1-201ENST00000604855 2072 ntBASIC4.96□□□□□ -1.61
SH3RF3Q8TEJ3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SH3RF3Q8TEJ3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
SH3RF3Q8TEJ3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 ENSAP3-201ENST00000312710 333 ntBASIC4.96□□□□□ -1.62
SH3RF3Q8TEJ3 RNA5SP513-201ENST00000364648 118 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms