Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL365440.1-201ENST00000436135 2167 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AC083843.2-201ENST00000568248 6253 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AC026523.2-201ENST00000625039 7739 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 RNU6-552P-201ENST00000362869 119 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 Y_RNA.100-201ENST00000363141 102 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 SNORA70.9-201ENST00000384370 135 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AL359634.1-202ENST00000404721 284 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 RPS4XP9-201ENST00000405151 780 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 TXNP7-201ENST00000406296 293 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 RN7SKP32-201ENST00000410167 303 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 RNU4-26P-201ENST00000410270 107 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 FGF7P3-201ENST00000454645 303 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 Y_RNA.632-201ENST00000459189 102 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AC022133.1-201ENST00000490961 571 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 BTF3P13-201ENST00000513224 490 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 RNU6-840P-201ENST00000517275 65 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AC022360.1-201ENST00000521058 340 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 OR5B19P-201ENST00000531766 928 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 MIR3171-201ENST00000584270 74 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 RN7SL52P-201ENST00000584271 284 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AC006504.6-201ENST00000590142 199 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 uc_338.5-201ENST00000611839 155 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 RN7SL722P-201ENST00000617780 284 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 RN7SL565P-201ENST00000618246 284 ntBASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPAS4Q8IUM7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.52
NPAS4Q8IUM7 AC025031.4-201ENST00000621248 3271 ntBASIC5.59□□□□□ -1.52
NPAS4Q8IUM7 TAB3P1-202ENST00000452645 1634 ntBASIC5.59□□□□□ -1.52
NPAS4Q8IUM7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NPAS4Q8IUM7 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.59□□□□□ -1.52
NPAS4Q8IUM7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
NPAS4Q8IUM7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NPAS4Q8IUM7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.59□□□□□ -1.52
NPAS4Q8IUM7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 THAP12P5-201ENST00000405864 2275 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 SNORA23-201ENST00000365128 182 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 RNU4-66P-201ENST00000365199 138 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 SNORA66-201ENST00000384792 133 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC016397.1-201ENST00000412463 242 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 MTND3P2-201ENST00000438452 342 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 BX679664.2-201ENST00000439282 283 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AL513533.1-201ENST00000453728 415 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 GLUD1P3-202ENST00000508551 200 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 OR5B10P-201ENST00000532869 642 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC087241.2-201ENST00000535801 324 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AL355836.1-201ENST00000555951 870 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC234771.5-201ENST00000600161 514 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AL355802.3-201ENST00000607571 545 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AL133215.3-201ENST00000609801 448 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AL161616.1-201ENST00000611867 286 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AL450472.3-201ENST00000615578 367 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms