Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 HMGB1P4-201ENST00000455362 567 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 RPL39P38-201ENST00000467018 153 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC104472.2-201ENST00000469035 601 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC100832.1-201ENST00000471945 383 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 RPL7AP10-201ENST00000481016 791 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC090686.1-201ENST00000481577 749 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 RPS4XP1-201ENST00000482189 787 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 RPS24P16-201ENST00000497294 392 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 RPS27AP18-201ENST00000515536 459 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 SCARNA16.2-201ENST00000516520 172 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 RNA5SP384-201ENST00000516615 116 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 IGKV2D-23-201ENST00000518179 286 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC022616.4-201ENST00000522985 181 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AP003385.6-201ENST00000531603 374 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AP004607.2-201ENST00000533949 322 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 MIR1269B-201ENST00000580405 75 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AL031320.1-201ENST00000604177 357 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC245517.5-201ENST00000611529 162 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AL606534.2-204ENST00000635008 178 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC093775.1-201ENST00000624154 1868 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.26-201ENST00000362539 101 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 U3.11-201ENST00000364476 212 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 SNORA5.1-201ENST00000384275 131 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 MIR1252-201ENST00000408861 65 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 DPPA2P3-201ENST00000411853 655 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 MRPS18CP6-201ENST00000423587 223 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 RPL19P16-201ENST00000433839 588 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 GAPDHP25-201ENST00000447061 1001 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC112492.4-201ENST00000456549 352 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 TBCAP3-201ENST00000512475 312 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 RNU6-475P-201ENST00000516073 104 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 RNU6-189P-201ENST00000516120 101 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 RN7SKP92-201ENST00000517266 244 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC011979.2-201ENST00000527568 352 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 HSPE1P20-201ENST00000538133 289 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC022080.3-201ENST00000544433 482 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 DUX4L52-201ENST00000549363 777 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC051619.2-201ENST00000559063 397 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC005341.1-201ENST00000571086 708 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 FKBP1AP1-201ENST00000594588 318 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 IMMP1LP3-201ENST00000604197 224 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AL022394.1-201ENST00000606979 292 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC000068.2-201ENST00000608816 460 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 SDR42E1P1-201ENST00000611327 477 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 uc_338.9-201ENST00000617424 182 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 FTX_2.1-201ENST00000618816 94 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 MIR8080-201ENST00000622224 89 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC091925.2-201ENST00000625059 256 ntBASIC4.88□□□□□ -1.63
ATG4DQ86TL0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4DQ86TL0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms