Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC073091.2-201ENST00000603205 907 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AL031320.1-201ENST00000604177 357 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC004853.1-201ENST00000604902 698 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 MIR98-201ENST00000606724 119 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC012150.2-201ENST00000621300 544 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC091953.2-201ENST00000623979 160 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC091905.1-201ENST00000624400 311 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 MIR4496-201ENST00000635896 61 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 A2MP1-204ENST00000566278 4130 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 Y_RNA.1-201ENST00000352915 104 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 RNU5E-1-201ENST00000362477 120 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 Y_RNA.88-201ENST00000363029 99 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 RNU6-867P-201ENST00000364956 107 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 RNU6-282P-201ENST00000365357 103 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 RHOT1P2-201ENST00000366423 333 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 Y_RNA.390-201ENST00000383932 102 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 Y_RNA.409-201ENST00000383990 98 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 RNU6-1103P-201ENST00000384150 107 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 SPTLC1P2-201ENST00000407089 121 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 MIR1277-201ENST00000408536 78 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 RPS23P10-201ENST00000416185 486 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC009480.2-201ENST00000422916 432 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 TIMM9P3-201ENST00000428659 274 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC133104.1-201ENST00000429100 218 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC000111.3-201ENST00000433478 193 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC002486.1-201ENST00000435098 391 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC108734.1-201ENST00000439549 399 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC114495.1-201ENST00000441274 436 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 RPS4XP4-201ENST00000443195 763 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC104308.1-201ENST00000454621 333 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 RPL31P58-201ENST00000469001 379 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC021382.1-201ENST00000483523 359 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC004453.1-201ENST00000487895 408 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC007182.2-201ENST00000489251 402 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC025445.1-201ENST00000502728 300 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 COX7A2P2-201ENST00000505291 250 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 PRDX4P1-201ENST00000507189 574 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 ARL4AP2-201ENST00000507378 601 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 RNU6-27P-201ENST00000516146 107 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 Vault.3-201ENST00000516676 95 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 NRON-201ENST00000517270 370 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC107934.1-201ENST00000522215 217 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 OR5AQ1P-201ENST00000527596 927 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AK6P1-201ENST00000540219 478 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 MIR3667-201ENST00000581025 74 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 MIR548S-201ENST00000581352 82 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC060771.1-201ENST00000582031 164 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC006504.3-201ENST00000586818 523 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 OR7E18P-201ENST00000592589 702 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AL512782.1-201ENST00000603093 364 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 BPIFA4P-203ENST00000603168 689 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC008638.3-201ENST00000603341 463 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC025946.2-201ENST00000603398 234 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC133644.2-201ENST00000608142 540 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 MIR6853-201ENST00000619642 74 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC068870.2-201ENST00000620635 389 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 AC091925.2-201ENST00000625059 256 ntBASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.09□□□□□ -1.75
PTCHD4Q6ZW05 IQCB2P-201ENST00000401788 1633 ntBASIC4.09□□□□□ -1.76
PTCHD4Q6ZW05 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTCHD4Q6ZW05 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PTCHD4Q6ZW05 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
PTCHD4Q6ZW05 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTCHD4Q6ZW05 MAPK10-263ENST00000641052 4307 ntBASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms