Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC012468.1-201ENST00000604888 430 ntBASIC3.98□□□□□ -1.77
USP41Q3LFD5 AC024560.3-201ENST00000608482 349 ntBASIC3.98□□□□□ -1.77
USP41Q3LFD5 AL357559.1-201ENST00000622228 274 ntBASIC3.98□□□□□ -1.77
USP41Q3LFD5 AL356596.1-201ENST00000624230 379 ntBASIC3.98□□□□□ -1.77
USP41Q3LFD5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.98□□□□□ -1.77
USP41Q3LFD5 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.98□□□□□ -1.77
USP41Q3LFD5 MTCO1P12-201ENST00000414273 1543 ntBASIC3.98□□□□□ -1.77
USP41Q3LFD5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP41Q3LFD5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.98□□□□□ -1.77
USP41Q3LFD5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 PABPC1P7-201ENST00000413177 1513 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP41Q3LFD5 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP41Q3LFD5 RNA5SP88-201ENST00000365560 109 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 RNU6-356P-201ENST00000384140 107 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 HMGB1P17-201ENST00000403495 628 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 MIR1250-201ENST00000408098 113 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP41Q3LFD5 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC005517.2-201ENST00000424673 553 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AL590103.1-201ENST00000434488 307 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AL117351.1-201ENST00000438864 766 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 RPL23AP33-201ENST00000442301 452 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC006480.1-201ENST00000449887 378 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC005297.2-201ENST00000450430 606 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 USP9YP34-201ENST00000453983 808 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 RNU7-136P-201ENST00000458819 69 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 SNORD108-201ENST00000459332 71 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC084198.1-201ENST00000477747 402 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP41Q3LFD5 AP000926.1-201ENST00000479573 241 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC090453.1-201ENST00000495560 436 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC010342.1-201ENST00000514047 877 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 OR5B10P-201ENST00000532869 642 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC010591.1-201ENST00000603941 649 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AL137849.1-201ENST00000604767 169 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 RNA5SP108-201ENST00000605921 117 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 RNU6-88P-201ENST00000606801 100 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 uc_338.32-201ENST00000615087 172 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC025588.4-201ENST00000615802 908 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC073968.1-201ENST00000618594 637 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AC007494.3-201ENST00000624660 743 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 U6.105-201ENST00000637379 88 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 IPO8P1-201ENST00000455509 3109 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP41Q3LFD5 UBE3AP2-201ENST00000429033 2259 ntBASIC3.97□□□□□ -1.77
USP41Q3LFD5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP41Q3LFD5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.96□□□□□ -1.77
USP41Q3LFD5 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC008725.1-201ENST00000605123 2263 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC007685.1-201ENST00000329806 452 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP41Q3LFD5 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 Y_RNA.302-201ENST00000364997 102 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP41Q3LFD5 RNA5SP424-201ENST00000390988 115 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 SOD2P1-201ENST00000396543 562 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 MIR1183-201ENST00000408856 89 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 RPL30P2-201ENST00000414021 291 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 HSFY4P-201ENST00000415994 1181 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC083875.1-201ENST00000419509 405 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 OFD1P18Y-201ENST00000420889 959 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 GLRXP1-201ENST00000423261 334 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AL590399.6-201ENST00000446396 307 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 RPL21P23-201ENST00000446654 460 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 MTND3P7-201ENST00000474435 343 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 RPL30P6-201ENST00000475925 342 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC092045.1-201ENST00000495716 1231 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP41Q3LFD5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC005178.1-201ENST00000508392 440 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC022861.1-201ENST00000522981 663 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms