Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
CHD9Q3L8U1 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.07□□□□□ -2.08
CHD9Q3L8U1 AC092881.1-201ENST00000638218 2733 ntBASIC2.07□□□□□ -2.08
CHD9Q3L8U1 AL353597.2-202ENST00000434901 373 ntBASIC2.07□□□□□ -2.08
CHD9Q3L8U1 AC011352.3-201ENST00000505162 593 ntBASIC2.07□□□□□ -2.08
CHD9Q3L8U1 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.07□□□□□ -2.08
CHD9Q3L8U1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.07□□□□□ -2.08
CHD9Q3L8U1 AC012119.1-201ENST00000603184 222 ntBASIC2.07□□□□□ -2.08
CHD9Q3L8U1 AC018690.1-201ENST00000608144 626 ntBASIC2.07□□□□□ -2.08
CHD9Q3L8U1 AC078899.5-201ENST00000612475 178 ntBASIC2.07□□□□□ -2.08
CHD9Q3L8U1 AC022960.2-201ENST00000616300 666 ntBASIC2.07□□□□□ -2.08
CHD9Q3L8U1 AC084768.2-201ENST00000622736 221 ntBASIC2.07□□□□□ -2.08
CHD9Q3L8U1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHD9Q3L8U1 SNORA67.5-201ENST00000391036 107 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 SAR1AP2-201ENST00000392696 594 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 AL627390.1-201ENST00000396055 340 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 AC005005.2-201ENST00000420779 380 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 MTCO3P21-201ENST00000430791 643 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 MLLT10P2-201ENST00000506434 249 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 AC117532.1-201ENST00000514638 323 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.06□□□□□ -2.08
CHD9Q3L8U1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.06□□□□□ -2.08
CHD9Q3L8U1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHD9Q3L8U1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHD9Q3L8U1 PROS2P-201ENST00000474651 1951 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 AC008173.1-201ENST00000418901 264 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 AC055855.1-201ENST00000489563 579 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 GZMAP1-201ENST00000503054 631 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 AC026412.2-201ENST00000512270 1075 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 OOSP1P2-201ENST00000579644 351 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 RPAP2P1-201ENST00000603626 1168 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 BX248123.2-201ENST00000606318 124 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.06□□□□□ -2.08
CHD9Q3L8U1 AC010680.1-201ENST00000590024 3590 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 AC007342.7-201ENST00000624610 2337 ntBASIC2.06□□□□□ -2.08
CHD9Q3L8U1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CHD9Q3L8U1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CHD9Q3L8U1 AL590762.3-201ENST00000436372 640 ntBASIC2.05□□□□□ -2.08
CHD9Q3L8U1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC2.05□□□□□ -2.08
CHD9Q3L8U1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.05□□□□□ -2.08
CHD9Q3L8U1 GAPDHP27-201ENST00000447427 1020 ntBASIC2.05□□□□□ -2.08
CHD9Q3L8U1 HMGB1P1-201ENST00000522557 636 ntBASIC2.05□□□□□ -2.08
CHD9Q3L8U1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.05□□□□□ -2.08
CHD9Q3L8U1 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
CHD9Q3L8U1 RPS7P5-201ENST00000441482 581 ntBASIC2.05□□□□□ -2.08
CHD9Q3L8U1 RN7SL283P-201ENST00000489055 303 ntBASIC2.05□□□□□ -2.08
CHD9Q3L8U1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.05□□□□□ -2.08
CHD9Q3L8U1 AC025260.1-201ENST00000548858 430 ntBASIC2.05□□□□□ -2.08
CHD9Q3L8U1 AL356280.1-201ENST00000603614 379 ntBASIC2.05□□□□□ -2.08
CHD9Q3L8U1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CHD9Q3L8U1 AC026241.1-201ENST00000517873 2142 ntBASIC2.05□□□□□ -2.08
CHD9Q3L8U1 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 SDR42E1P3-201ENST00000438345 502 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AL591719.1-201ENST00000444669 744 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 TTC39CP1-201ENST00000512513 755 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AL606537.1-201ENST00000607258 2011 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AL451074.3-201ENST00000437709 472 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AC106872.2-201ENST00000494303 480 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AC011978.2-201ENST00000569835 2054 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 RPL21P75-201ENST00000396599 483 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 RPL21P1-201ENST00000399532 476 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 RPL21P28-201ENST00000401418 483 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AL592114.1-201ENST00000403842 483 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 RPS7P2-201ENST00000435134 607 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 RPL21P16-201ENST00000495531 483 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 BMS1P7-201ENST00000602440 1052 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AL451049.1-201ENST00000608672 497 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AL110115.1-201ENST00000614396 364 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AL122125.1-201ENST00000616999 600 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 AC084035.1-201ENST00000634543 607 ntBASIC2.04□□□□□ -2.08
CHD9Q3L8U1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHD9Q3L8U1 RNU6-707P-201ENST00000364647 95 ntBASIC2.03□□□□□ -2.08
CHD9Q3L8U1 RPL23AP39-201ENST00000415533 405 ntBASIC2.03□□□□□ -2.08
CHD9Q3L8U1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.03□□□□□ -2.08
CHD9Q3L8U1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.03□□□□□ -2.08
CHD9Q3L8U1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHD9Q3L8U1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHD9Q3L8U1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.03□□□□□ -2.08
CHD9Q3L8U1 MIR1294-201ENST00000408503 142 ntBASIC2.03□□□□□ -2.08
CHD9Q3L8U1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.03□□□□□ -2.08
CHD9Q3L8U1 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.03□□□□□ -2.08
CHD9Q3L8U1 AC106730.3-201ENST00000624568 641 ntBASIC2.03□□□□□ -2.08
CHD9Q3L8U1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 427.2 ms