Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.33□□□□□ -1.56
SF3A1Q15459 AC068790.5-201ENST00000602741 355 ntBASIC5.33□□□□□ -1.56
SF3A1Q15459 AC004067.1-201ENST00000608733 700 ntBASIC5.33□□□□□ -1.56
SF3A1Q15459 AL592295.2-201ENST00000612578 206 ntBASIC5.33□□□□□ -1.56
SF3A1Q15459 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.33□□□□□ -1.56
SF3A1Q15459 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.33□□□□□ -1.56
SF3A1Q15459 AC112200.1-201ENST00000625015 234 ntBASIC5.33□□□□□ -1.56
SF3A1Q15459 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.33□□□□□ -1.56
SF3A1Q15459 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SF3A1Q15459 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.33□□□□□ -1.56
SF3A1Q15459 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SF3A1Q15459 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.33□□□□□ -1.56
SF3A1Q15459 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SF3A1Q15459 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.32□□□□□ -1.56
SF3A1Q15459 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
SF3A1Q15459 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SF3A1Q15459 RNU4-55P-201ENST00000410731 137 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 VDAC1P9-201ENST00000412766 841 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 RPL23AP38-201ENST00000423801 469 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 AC024082.2-201ENST00000434771 238 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.32□□□□□ -1.56
SF3A1Q15459 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.32□□□□□ -1.56
SF3A1Q15459 RPS24P6-201ENST00000452670 400 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 NANOGP10-201ENST00000453325 895 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 AC005008.1-201ENST00000456151 612 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.32□□□□□ -1.56
SF3A1Q15459 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.32□□□□□ -1.56
SF3A1Q15459 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.32□□□□□ -1.56
SF3A1Q15459 RNA5SP464-201ENST00000516251 108 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 RNU6-840P-201ENST00000517275 65 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 AC022616.3-201ENST00000523940 148 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.32□□□□□ -1.56
SF3A1Q15459 RPL21P7-201ENST00000557463 483 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 UBE2FP2-201ENST00000566646 462 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.32□□□□□ -1.56
SF3A1Q15459 MIR3167-201ENST00000579623 85 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.32□□□□□ -1.56
SF3A1Q15459 MIR4480-201ENST00000582492 71 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.32□□□□□ -1.56
SF3A1Q15459 AL512782.1-201ENST00000603093 364 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 TUG1_2.1-201ENST00000614234 87 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 AC140113.4-201ENST00000622087 222 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.32□□□□□ -1.56
SF3A1Q15459 MIR6863-201ENST00000636112 90 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SF3A1Q15459 NXPH1-205ENST00000602349 1953 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 EOGT-210ENST00000615922 1931 ntBASIC5.32□□□□□ -1.56
SF3A1Q15459 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SF3A1Q15459 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SF3A1Q15459 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
SF3A1Q15459 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.32□□□□□ -1.56
SF3A1Q15459 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SF3A1Q15459 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SF3A1Q15459 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.32□□□□□ -1.56
SF3A1Q15459 AC005832.2-201ENST00000538921 1430 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SF3A1Q15459 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SF3A1Q15459 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SF3A1Q15459 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SF3A1Q15459 SNORA56-201ENST00000383966 129 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SF3A1Q15459 MIR708-201ENST00000390708 88 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 RNA5SP239-201ENST00000410218 129 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 RNA5SP113-201ENST00000410486 84 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 RPL21P24-201ENST00000413752 448 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.31□□□□□ -1.56
SF3A1Q15459 UBE2V1P10-201ENST00000414685 269 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AC090774.1-201ENST00000435925 246 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.31□□□□□ -1.56
SF3A1Q15459 snoU13.4-201ENST00000458916 104 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AC008481.1-201ENST00000463278 396 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AC007182.2-201ENST00000489251 402 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 RPL23AP55-201ENST00000498163 452 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 RN7SKP276-201ENST00000516242 268 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AC008489.1-201ENST00000524271 483 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.31□□□□□ -1.56
SF3A1Q15459 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.31□□□□□ -1.56
SF3A1Q15459 RN7SL652P-201ENST00000577769 300 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 MIR3934-201ENST00000579806 107 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AC091178.1-203ENST00000584586 279 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.31□□□□□ -1.56
SF3A1Q15459 AF038458.1-201ENST00000588406 262 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AL031320.1-201ENST00000604177 357 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AL391358.1-201ENST00000605342 190 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AC007684.1-201ENST00000609671 477 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AC024941.1-201ENST00000612250 334 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AL158196.1-201ENST00000616786 434 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 C2orf27A-204ENST00000623058 969 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.31□□□□□ -1.56
SF3A1Q15459 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SF3A1Q15459 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.31□□□□□ -1.56
SF3A1Q15459 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.31□□□□□ -1.56
SF3A1Q15459 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SF3A1Q15459 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SF3A1Q15459 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
SF3A1Q15459 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SF3A1Q15459 AC027290.2-201ENST00000623210 18662 ntBASIC5.31□□□□□ -1.56
SF3A1Q15459 TAB3P1-202ENST00000452645 1634 ntBASIC5.3□□□□□ -1.56
SF3A1Q15459 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.3□□□□□ -1.56
SF3A1Q15459 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms