Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC019155.1-201ENST00000382242 574 ntBASIC3.59□□□□□ -1.84
HMGXB3Q12766 RNU1-138P-201ENST00000384093 164 ntBASIC3.59□□□□□ -1.84
HMGXB3Q12766 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
HMGXB3Q12766 AC234781.4-201ENST00000419384 244 ntBASIC3.59□□□□□ -1.84
HMGXB3Q12766 FABP5P13-201ENST00000452144 328 ntBASIC3.59□□□□□ -1.84
HMGXB3Q12766 AL845331.3-202ENST00000562856 261 ntBASIC3.59□□□□□ -1.84
HMGXB3Q12766 AC107294.3-201ENST00000609211 526 ntBASIC3.59□□□□□ -1.84
HMGXB3Q12766 RPL23AP61-201ENST00000623642 466 ntBASIC3.59□□□□□ -1.84
HMGXB3Q12766 CYP3A51P-201ENST00000633513 256 ntBASIC3.59□□□□□ -1.84
HMGXB3Q12766 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.59□□□□□ -1.84
HMGXB3Q12766 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
HMGXB3Q12766 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGXB3Q12766 RNA5SP190-201ENST00000365222 118 ntBASIC3.58□□□□□ -1.84
HMGXB3Q12766 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGXB3Q12766 MUPP-201ENST00000438111 566 ntBASIC3.58□□□□□ -1.84
HMGXB3Q12766 AC009237.8-201ENST00000445492 379 ntBASIC3.58□□□□□ -1.84
HMGXB3Q12766 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.58□□□□□ -1.84
HMGXB3Q12766 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGXB3Q12766 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.58□□□□□ -1.84
HMGXB3Q12766 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HMGXB3Q12766 FAM35CP-201ENST00000554755 2470 ntBASIC3.57□□□□□ -1.84
HMGXB3Q12766 ZNF542P-204ENST00000482727 1305 ntBASIC3.57□□□□□ -1.84
HMGXB3Q12766 AC005005.2-201ENST00000420779 380 ntBASIC3.57□□□□□ -1.84
HMGXB3Q12766 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGXB3Q12766 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.57□□□□□ -1.84
HMGXB3Q12766 AC092650.2-201ENST00000619984 902 ntBASIC3.57□□□□□ -1.84
HMGXB3Q12766 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGXB3Q12766 AC090229.1-201ENST00000590983 1609 ntBASIC3.57□□□□□ -1.84
HMGXB3Q12766 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGXB3Q12766 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGXB3Q12766 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGXB3Q12766 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.56□□□□□ -1.84
HMGXB3Q12766 AP1B1P2-201ENST00000416196 106 ntBASIC3.56□□□□□ -1.84
HMGXB3Q12766 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGXB3Q12766 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGXB3Q12766 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.56□□□□□ -1.84
HMGXB3Q12766 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGXB3Q12766 snoZ278.1-201ENST00000517059 112 ntBASIC3.56□□□□□ -1.84
HMGXB3Q12766 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.56□□□□□ -1.84
HMGXB3Q12766 HMGB3P26-201ENST00000560051 582 ntBASIC3.56□□□□□ -1.84
HMGXB3Q12766 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGXB3Q12766 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HMGXB3Q12766 MIR518E-201ENST00000385252 88 ntBASIC3.55□□□□□ -1.84
HMGXB3Q12766 FGF7P8-201ENST00000402994 292 ntBASIC3.55□□□□□ -1.84
HMGXB3Q12766 AL512430.2-201ENST00000406786 339 ntBASIC3.55□□□□□ -1.84
HMGXB3Q12766 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGXB3Q12766 AC140059.1-201ENST00000489238 361 ntBASIC3.55□□□□□ -1.84
HMGXB3Q12766 AC005840.1-201ENST00000498412 377 ntBASIC3.55□□□□□ -1.84
HMGXB3Q12766 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGXB3Q12766 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGXB3Q12766 AL356280.1-201ENST00000603614 379 ntBASIC3.55□□□□□ -1.84
HMGXB3Q12766 AC091046.2-201ENST00000620775 665 ntBASIC3.55□□□□□ -1.84
HMGXB3Q12766 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGXB3Q12766 RNU4-62P-201ENST00000410125 130 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 BTF3P4-201ENST00000418852 495 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AC091544.1-201ENST00000484702 348 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGXB3Q12766 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGXB3Q12766 CBX3P5-201ENST00000552017 521 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGXB3Q12766 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGXB3Q12766 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGXB3Q12766 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HMGXB3Q12766 MIR337-201ENST00000362281 93 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 MTCO3P31-201ENST00000405526 789 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 RPL36AP6-201ENST00000435770 321 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 SDR42E1P3-201ENST00000438345 502 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL357520.1-201ENST00000441557 453 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 RN7SKP82-201ENST00000516786 223 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL389895.1-201ENST00000554127 252 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.6-201ENST00000603753 252 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.11-201ENST00000604059 253 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL160237.3-201ENST00000604114 1013 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.10-201ENST00000604330 253 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AC008162.1-201ENST00000604718 254 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.1-201ENST00000604752 252 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.2-201ENST00000604983 252 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.5-201ENST00000605253 252 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.4-201ENST00000605279 254 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.12-201ENST00000605291 253 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.8-201ENST00000605353 252 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.9-201ENST00000605428 253 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AL670379.7-201ENST00000605823 252 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 AC074140.1-201ENST00000621617 208 ntBASIC3.54□□□□□ -1.84
HMGXB3Q12766 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGXB3Q12766 PNPT1P2-201ENST00000456768 2050 ntBASIC3.53□□□□□ -1.84
HMGXB3Q12766 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
HMGXB3Q12766 AC004520.1-201ENST00000608362 1413 ntBASIC3.53□□□□□ -1.84
HMGXB3Q12766 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HMGXB3Q12766 AL627390.1-201ENST00000396055 340 ntBASIC3.53□□□□□ -1.84
HMGXB3Q12766 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGXB3Q12766 AP000275.1-201ENST00000411943 390 ntBASIC3.53□□□□□ -1.84
HMGXB3Q12766 AC012498.1-201ENST00000424037 437 ntBASIC3.53□□□□□ -1.84
HMGXB3Q12766 CR769767.1-201ENST00000436337 346 ntBASIC3.53□□□□□ -1.84
HMGXB3Q12766 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGXB3Q12766 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGXB3Q12766 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.53□□□□□ -1.84
HMGXB3Q12766 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGXB3Q12766 MTND5P23-201ENST00000430812 1655 ntBASIC3.53□□□□□ -1.85
HMGXB3Q12766 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms