Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.21□□□□□ -1.9
CBX1P83916 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.21□□□□□ -1.9
CBX1P83916 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CBX1P83916 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CBX1P83916 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CBX1P83916 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CBX1P83916 AC126755.2-208ENST00000327792 462 ntBASIC3.2□□□□□ -1.9
CBX1P83916 AC138969.1-213ENST00000331436 462 ntBASIC3.2□□□□□ -1.9
CBX1P83916 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CBX1P83916 SNORD51-201ENST00000384320 80 ntBASIC3.2□□□□□ -1.9
CBX1P83916 MIR181A2-201ENST00000384863 110 ntBASIC3.2□□□□□ -1.9
CBX1P83916 RNU2-15P-201ENST00000410692 191 ntBASIC3.2□□□□□ -1.9
CBX1P83916 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.2□□□□□ -1.9
CBX1P83916 OR8F1P-201ENST00000425243 930 ntBASIC3.2□□□□□ -1.9
CBX1P83916 HIGD1AP11-201ENST00000438361 280 ntBASIC3.2□□□□□ -1.9
CBX1P83916 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CBX1P83916 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.2□□□□□ -1.9
CBX1P83916 AL133162.1-201ENST00000463228 453 ntBASIC3.2□□□□□ -1.9
CBX1P83916 AC090525.1-201ENST00000479116 478 ntBASIC3.2□□□□□ -1.9
CBX1P83916 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.2□□□□□ -1.9
CBX1P83916 AC016550.1-201ENST00000505348 785 ntBASIC3.2□□□□□ -1.9
CBX1P83916 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CBX1P83916 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CBX1P83916 AC092593.2-201ENST00000513866 913 ntBASIC3.2□□□□□ -1.9
CBX1P83916 HMGN1P15-201ENST00000513870 295 ntBASIC3.2□□□□□ -1.9
CBX1P83916 RANP9-201ENST00000519957 271 ntBASIC3.2□□□□□ -1.9
CBX1P83916 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.2□□□□□ -1.9
CBX1P83916 MTCO3P15-201ENST00000526563 574 ntBASIC3.2□□□□□ -1.9
CBX1P83916 AC068339.2-201ENST00000534395 618 ntBASIC3.2□□□□□ -1.9
CBX1P83916 OR8R1P-201ENST00000543943 764 ntBASIC3.2□□□□□ -1.9
CBX1P83916 AL391156.1-201ENST00000554965 554 ntBASIC3.2□□□□□ -1.9
CBX1P83916 FAM60BP-201ENST00000578364 658 ntBASIC3.2□□□□□ -1.9
CBX1P83916 COX6CP3-201ENST00000580869 223 ntBASIC3.2□□□□□ -1.9
CBX1P83916 BDH2P1-201ENST00000602288 736 ntBASIC3.2□□□□□ -1.9
CBX1P83916 RPL23AP88-201ENST00000605759 454 ntBASIC3.2□□□□□ -1.9
CBX1P83916 AC090912.3-201ENST00000609775 533 ntBASIC3.2□□□□□ -1.9
CBX1P83916 AC068831.7-201ENST00000616954 363 ntBASIC3.2□□□□□ -1.9
CBX1P83916 AC127502.3-201ENST00000636170 1206 ntBASIC3.2□□□□□ -1.9
CBX1P83916 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CBX1P83916 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CBX1P83916 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CBX1P83916 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CBX1P83916 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CBX1P83916 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CBX1P83916 MIR372-201ENST00000362225 67 ntBASIC3.19□□□□□ -1.9
CBX1P83916 OR6K3-202ENST00000368146 996 ntBASIC3.19□□□□□ -1.9
CBX1P83916 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CBX1P83916 SNORA40.4-201ENST00000390971 128 ntBASIC3.19□□□□□ -1.9
CBX1P83916 DPRXP1-201ENST00000426312 460 ntBASIC3.19□□□□□ -1.9
CBX1P83916 RSL24D1P6-201ENST00000426934 401 ntBASIC3.19□□□□□ -1.9
CBX1P83916 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.19□□□□□ -1.9
CBX1P83916 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.19□□□□□ -1.9
CBX1P83916 AC103975.1-201ENST00000482506 483 ntBASIC3.19□□□□□ -1.9
CBX1P83916 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CBX1P83916 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.19□□□□□ -1.9
CBX1P83916 PRELID3BP5-201ENST00000508612 460 ntBASIC3.19□□□□□ -1.9
CBX1P83916 AC026412.2-201ENST00000512270 1075 ntBASIC3.19□□□□□ -1.9
CBX1P83916 RNU6-1095P-201ENST00000516148 108 ntBASIC3.19□□□□□ -1.9
CBX1P83916 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
CBX1P83916 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.19□□□□□ -1.9
CBX1P83916 AP001189.2-201ENST00000527320 189 ntBASIC3.19□□□□□ -1.9
CBX1P83916 OR8I1P-201ENST00000529291 931 ntBASIC3.19□□□□□ -1.9
CBX1P83916 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.19□□□□□ -1.9
CBX1P83916 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.19□□□□□ -1.9
CBX1P83916 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.19□□□□□ -1.9
CBX1P83916 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.19□□□□□ -1.9
CBX1P83916 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CBX1P83916 AC090666.1-201ENST00000578241 445 ntBASIC3.19□□□□□ -1.9
CBX1P83916 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.19□□□□□ -1.9
CBX1P83916 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CBX1P83916 AL353748.2-201ENST00000622148 471 ntBASIC3.19□□□□□ -1.9
CBX1P83916 AC079228.1-201ENST00000624774 1049 ntBASIC3.19□□□□□ -1.9
CBX1P83916 AC119674.1-207ENST00000641355 633 ntBASIC3.19□□□□□ -1.9
CBX1P83916 MFSD8-245ENST00000641743 948 ntBASIC3.19□□□□□ -1.9
CBX1P83916 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CBX1P83916 ZNF807-201ENST00000328088 1707 ntBASIC3.19□□□□□ -1.9
CBX1P83916 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CBX1P83916 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CBX1P83916 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.18□□□□□ -1.9
CBX1P83916 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CBX1P83916 Z99496.1-201ENST00000469424 1477 ntBASIC3.18□□□□□ -1.9
CBX1P83916 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.18□□□□□ -1.9
CBX1P83916 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CBX1P83916 RNU6-707P-201ENST00000364647 95 ntBASIC3.18□□□□□ -1.9
CBX1P83916 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CBX1P83916 RNU1-13P-201ENST00000384499 162 ntBASIC3.18□□□□□ -1.9
CBX1P83916 RNU6-878P-201ENST00000384578 110 ntBASIC3.18□□□□□ -1.9
CBX1P83916 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CBX1P83916 RPL21P75-201ENST00000396599 483 ntBASIC3.18□□□□□ -1.9
CBX1P83916 RPL32P23-201ENST00000397237 405 ntBASIC3.18□□□□□ -1.9
CBX1P83916 AC110754.1-201ENST00000399740 601 ntBASIC3.18□□□□□ -1.9
CBX1P83916 RPL21P28-201ENST00000401418 483 ntBASIC3.18□□□□□ -1.9
CBX1P83916 AL592114.1-201ENST00000403842 483 ntBASIC3.18□□□□□ -1.9
CBX1P83916 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.18□□□□□ -1.9
CBX1P83916 AL024507.1-201ENST00000412741 274 ntBASIC3.18□□□□□ -1.9
CBX1P83916 RPS7P9-201ENST00000414704 586 ntBASIC3.18□□□□□ -1.9
CBX1P83916 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.18□□□□□ -1.9
CBX1P83916 RPL21P32-201ENST00000419877 477 ntBASIC3.18□□□□□ -1.9
CBX1P83916 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.18□□□□□ -1.9
CBX1P83916 UBE2D3P2-201ENST00000424409 445 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms