Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AP001207.2-201ENST00000519490 539 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP54P61011 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.43□□□□□ -1.86
SRP54P61011 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP54P61011 AC008489.1-201ENST00000524271 483 ntBASIC3.43□□□□□ -1.86
SRP54P61011 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.43□□□□□ -1.86
SRP54P61011 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.43□□□□□ -1.86
SRP54P61011 HIGD1AP17-201ENST00000554576 276 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP54P61011 AC037471.2-201ENST00000564941 598 ntBASIC3.43□□□□□ -1.86
SRP54P61011 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.43□□□□□ -1.86
SRP54P61011 VN1R83P-201ENST00000595685 445 ntBASIC3.43□□□□□ -1.86
SRP54P61011 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.43□□□□□ -1.86
SRP54P61011 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP54P61011 AC069431.2-201ENST00000604149 1099 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AL158050.2-201ENST00000605336 568 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AL138478.1-201ENST00000612252 832 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AC099654.8-201ENST00000637757 681 ntBASIC3.43□□□□□ -1.86
SRP54P61011 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.43□□□□□ -1.86
SRP54P61011 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.43□□□□□ -1.86
SRP54P61011 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SRP54P61011 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.43□□□□□ -1.86
SRP54P61011 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SRP54P61011 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.42□□□□□ -1.86
SRP54P61011 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SRP54P61011 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SRP54P61011 RNU6-1074P-201ENST00000383995 104 ntBASIC3.42□□□□□ -1.86
SRP54P61011 MIR620-201ENST00000385232 95 ntBASIC3.42□□□□□ -1.86
SRP54P61011 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.42□□□□□ -1.86
SRP54P61011 RNU4-65P-201ENST00000410473 140 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AL161449.1-201ENST00000414531 1199 ntBASIC3.42□□□□□ -1.86
SRP54P61011 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.42□□□□□ -1.86
SRP54P61011 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.42□□□□□ -1.86
SRP54P61011 GTF2IP23-201ENST00000423746 351 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AC006989.1-201ENST00000427212 131 ntBASIC3.42□□□□□ -1.86
SRP54P61011 PSMA6P3-201ENST00000428242 164 ntBASIC3.42□□□□□ -1.86
SRP54P61011 MTND2P20-201ENST00000440805 661 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.42□□□□□ -1.86
SRP54P61011 SLC31A1P1-201ENST00000451221 567 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.42□□□□□ -1.86
SRP54P61011 PTGES3P5-201ENST00000455109 434 ntBASIC3.42□□□□□ -1.86
SRP54P61011 SUMO2P2-201ENST00000456482 255 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AC087312.1-201ENST00000471411 480 ntBASIC3.42□□□□□ -1.86
SRP54P61011 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.42□□□□□ -1.86
SRP54P61011 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.42□□□□□ -1.86
SRP54P61011 MTND3P3-201ENST00000505004 126 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AC105914.1-201ENST00000511798 226 ntBASIC3.42□□□□□ -1.86
SRP54P61011 RNU1-61P-201ENST00000516107 151 ntBASIC3.42□□□□□ -1.86
SRP54P61011 RN7SKP31-201ENST00000516354 278 ntBASIC3.42□□□□□ -1.86
SRP54P61011 RNA5SP380-201ENST00000517190 98 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.42□□□□□ -1.86
SRP54P61011 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.42□□□□□ -1.86
SRP54P61011 OR4T1P-201ENST00000554933 911 ntBASIC3.42□□□□□ -1.86
SRP54P61011 HSPE1P3-201ENST00000559254 309 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.42□□□□□ -1.86
SRP54P61011 MIR4637-201ENST00000582405 84 ntBASIC3.42□□□□□ -1.86
SRP54P61011 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.42□□□□□ -1.86
SRP54P61011 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SRP54P61011 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.42□□□□□ -1.86
SRP54P61011 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.42□□□□□ -1.86
SRP54P61011 CYCSP41-201ENST00000616920 296 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AL121895.2-201ENST00000619558 447 ntBASIC3.42□□□□□ -1.86
SRP54P61011 OR6C71P-202ENST00000641886 1107 ntBASIC3.42□□□□□ -1.86
SRP54P61011 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SRP54P61011 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.42□□□□□ -1.86
SRP54P61011 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.42□□□□□ -1.86
SRP54P61011 MFSD8-233ENST00000641482 4860 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AL645937.1-201ENST00000641739 1652 ntBASIC3.42□□□□□ -1.86
SRP54P61011 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SRP54P61011 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
SRP54P61011 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
SRP54P61011 CEP170P1-201ENST00000502249 4587 ntBASIC3.42□□□□□ -1.86
SRP54P61011 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SRP54P61011 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SRP54P61011 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.42□□□□□ -1.86
SRP54P61011 AC109315.1-201ENST00000584143 1347 ntBASIC3.42□□□□□ -1.86
SRP54P61011 AC007256.1-201ENST00000392253 2765 ntBASIC3.41□□□□□ -1.86
SRP54P61011 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP54P61011 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP54P61011 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP54P61011 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP54P61011 SNORA9-201ENST00000384215 133 ntBASIC3.41□□□□□ -1.86
SRP54P61011 MIR491-201ENST00000384877 84 ntBASIC3.41□□□□□ -1.86
SRP54P61011 SNRPEP2-201ENST00000397592 279 ntBASIC3.41□□□□□ -1.86
SRP54P61011 BX323014.1-201ENST00000412876 237 ntBASIC3.41□□□□□ -1.86
SRP54P61011 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP54P61011 EZH2P1-201ENST00000431167 291 ntBASIC3.41□□□□□ -1.86
SRP54P61011 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP54P61011 AC084357.1-201ENST00000473404 255 ntBASIC3.41□□□□□ -1.86
SRP54P61011 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP54P61011 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP54P61011 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.41□□□□□ -1.86
SRP54P61011 AC010265.1-201ENST00000513509 211 ntBASIC3.41□□□□□ -1.86
SRP54P61011 AC104986.1-201ENST00000517978 436 ntBASIC3.41□□□□□ -1.86
SRP54P61011 IGKV2-26-201ENST00000518305 343 ntBASIC3.41□□□□□ -1.86
SRP54P61011 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.41□□□□□ -1.86
SRP54P61011 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SRP54P61011 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP54P61011 AL121576.1-201ENST00000556055 276 ntBASIC3.41□□□□□ -1.86
SRP54P61011 MTND3P13-201ENST00000574391 343 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms