Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC125494.3-201ENST00000602759 455 ntBASIC2.54□□□□□ -2
ACTBP60709 AL606834.2-201ENST00000602954 668 ntBASIC2.54□□□□□ -2
ACTBP60709 PRELID3BP8-201ENST00000604148 295 ntBASIC2.54□□□□□ -2
ACTBP60709 AC016911.1-201ENST00000613297 452 ntBASIC2.54□□□□□ -2
ACTBP60709 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.54□□□□□ -2
ACTBP60709 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.54□□□□□ -2
ACTBP60709 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.54□□□□□ -2
ACTBP60709 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.54□□□□□ -2
ACTBP60709 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.54□□□□□ -2
ACTBP60709 AL356118.1-201ENST00000635272 1078 ntBASIC2.54□□□□□ -2
ACTBP60709 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
ACTBP60709 MIR622-201ENST00000638396 96 ntBASIC2.54□□□□□ -2
ACTBP60709 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.54□□□□□ -2
ACTBP60709 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.54□□□□□ -2
ACTBP60709 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
ACTBP60709 ASNSP3-201ENST00000451989 1306 ntBASIC2.53□□□□□ -2
ACTBP60709 RNVU1-14-201ENST00000384770 164 ntBASIC2.53□□□□□ -2
ACTBP60709 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.53□□□□□ -2
ACTBP60709 RNU4-47P-201ENST00000410876 114 ntBASIC2.53□□□□□ -2
ACTBP60709 RNA5SP120-201ENST00000410900 112 ntBASIC2.53□□□□□ -2
ACTBP60709 AC096533.1-201ENST00000411645 353 ntBASIC2.53□□□□□ -2
ACTBP60709 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.53□□□□□ -2
ACTBP60709 AC092447.6-201ENST00000414578 210 ntBASIC2.53□□□□□ -2
ACTBP60709 AL096701.2-201ENST00000416920 238 ntBASIC2.53□□□□□ -2
ACTBP60709 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.53□□□□□ -2
ACTBP60709 AL353678.1-201ENST00000422735 741 ntBASIC2.53□□□□□ -2
ACTBP60709 AC096632.1-201ENST00000427395 310 ntBASIC2.53□□□□□ -2
ACTBP60709 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.53□□□□□ -2
ACTBP60709 RPL23AP83-201ENST00000434984 473 ntBASIC2.53□□□□□ -2
ACTBP60709 RPS29P6-201ENST00000438196 145 ntBASIC2.53□□□□□ -2
ACTBP60709 AL645638.1-201ENST00000440519 361 ntBASIC2.53□□□□□ -2
ACTBP60709 AL591503.2-201ENST00000442314 1005 ntBASIC2.53□□□□□ -2
ACTBP60709 RPS3AP12-201ENST00000443616 753 ntBASIC2.53□□□□□ -2
ACTBP60709 Z75741.1-201ENST00000446793 314 ntBASIC2.53□□□□□ -2
ACTBP60709 AC004022.1-201ENST00000447766 1066 ntBASIC2.53□□□□□ -2
ACTBP60709 AC009961.3-201ENST00000449832 765 ntBASIC2.53□□□□□ -2
ACTBP60709 RN7SL863P-201ENST00000462370 296 ntBASIC2.53□□□□□ -2
ACTBP60709 CAB39P1-201ENST00000502277 460 ntBASIC2.53□□□□□ -2
ACTBP60709 PRELID3BP6-201ENST00000503839 571 ntBASIC2.53□□□□□ -2
ACTBP60709 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.53□□□□□ -2
ACTBP60709 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.53□□□□□ -2
ACTBP60709 OR7K1P-201ENST00000546439 926 ntBASIC2.53□□□□□ -2
ACTBP60709 AC107016.2-201ENST00000547968 190 ntBASIC2.53□□□□□ -2
ACTBP60709 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.53□□□□□ -2
ACTBP60709 AC027104.1-201ENST00000563702 681 ntBASIC2.53□□□□□ -2
ACTBP60709 AC005412.1-201ENST00000580812 1049 ntBASIC2.53□□□□□ -2
ACTBP60709 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.53□□□□□ -2
ACTBP60709 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.53□□□□□ -2
ACTBP60709 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.53□□□□□ -2
ACTBP60709 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.53□□□□□ -2
ACTBP60709 AC007179.3-201ENST00000604976 235 ntBASIC2.53□□□□□ -2
ACTBP60709 AC004775.1-201ENST00000607389 753 ntBASIC2.53□□□□□ -2
ACTBP60709 AC090115.4-201ENST00000609970 188 ntBASIC2.53□□□□□ -2
ACTBP60709 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.53□□□□□ -2
ACTBP60709 AC138932.5-201ENST00000617759 563 ntBASIC2.53□□□□□ -2
ACTBP60709 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.53□□□□□ -2
ACTBP60709 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.53□□□□□ -2
ACTBP60709 AC024595.1-201ENST00000623088 387 ntBASIC2.53□□□□□ -2
ACTBP60709 AC092608.3-201ENST00000625017 386 ntBASIC2.53□□□□□ -2
ACTBP60709 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ACTBP60709 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.52□□□□□ -2.01
ACTBP60709 AC009501.3-201ENST00000605001 1352 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AC087359.1-201ENST00000508335 1740 ntBASIC2.52□□□□□ -2.01
ACTBP60709 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ACTBP60709 ENSAP3-201ENST00000312710 333 ntBASIC2.52□□□□□ -2.01
ACTBP60709 MIR208A-201ENST00000362287 71 ntBASIC2.52□□□□□ -2.01
ACTBP60709 RNU1-35P-201ENST00000362782 153 ntBASIC2.52□□□□□ -2.01
ACTBP60709 SNORD51.1-201ENST00000365405 77 ntBASIC2.52□□□□□ -2.01
ACTBP60709 MIR592-201ENST00000384959 97 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.52□□□□□ -2.01
ACTBP60709 RPL7P30-201ENST00000420888 709 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AL590623.1-201ENST00000427864 105 ntBASIC2.52□□□□□ -2.01
ACTBP60709 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.52□□□□□ -2.01
ACTBP60709 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.52□□□□□ -2.01
ACTBP60709 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.52□□□□□ -2.01
ACTBP60709 AC016696.1-201ENST00000446949 318 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AC234775.1-201ENST00000454247 670 ntBASIC2.52□□□□□ -2.01
ACTBP60709 RN7SL297P-201ENST00000483161 293 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AL358832.1-201ENST00000497800 389 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.52□□□□□ -2.01
ACTBP60709 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.52□□□□□ -2.01
ACTBP60709 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.52□□□□□ -2.01
ACTBP60709 AC010625.1-201ENST00000511296 403 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AC025881.1-201ENST00000518851 512 ntBASIC2.52□□□□□ -2.01
ACTBP60709 MTCO1P47-201ENST00000523889 1271 ntBASIC2.52□□□□□ -2.01
ACTBP60709 FAM60DP-201ENST00000524174 632 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AP000790.1-201ENST00000528891 737 ntBASIC2.52□□□□□ -2.01
ACTBP60709 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ACTBP60709 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ACTBP60709 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.52□□□□□ -2.01
ACTBP60709 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.52□□□□□ -2.01
ACTBP60709 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.52□□□□□ -2.01
ACTBP60709 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.52□□□□□ -2.01
ACTBP60709 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.52□□□□□ -2.01
ACTBP60709 AC008739.2-201ENST00000597006 317 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AL161734.1-201ENST00000609720 557 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AC096577.2-201ENST00000611455 153 ntBASIC2.52□□□□□ -2.01
ACTBP60709 MIR7112-201ENST00000616126 65 ntBASIC2.52□□□□□ -2.01
ACTBP60709 FRG1HP-204ENST00000617940 757 ntBASIC2.52□□□□□ -2.01
ACTBP60709 AC068880.5-201ENST00000624331 290 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms