Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LIM2P55344 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LIM2P55344 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
LIM2P55344 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LIM2P55344 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LIM2P55344 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LIM2P55344 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LIM2P55344 RNA5SP383-201ENST00000362934 120 ntBASIC3.06□□□□□ -1.92
LIM2P55344 RNU4-92P-201ENST00000363783 136 ntBASIC3.06□□□□□ -1.92
LIM2P55344 RNU6-878P-201ENST00000384578 110 ntBASIC3.06□□□□□ -1.92
LIM2P55344 ERHP2-201ENST00000402323 299 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AL357075.1-201ENST00000404107 726 ntBASIC3.06□□□□□ -1.92
LIM2P55344 RNU6-584P-201ENST00000410350 95 ntBASIC3.06□□□□□ -1.92
LIM2P55344 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.06□□□□□ -1.92
LIM2P55344 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.06□□□□□ -1.92
LIM2P55344 AL513175.2-201ENST00000422071 443 ntBASIC3.06□□□□□ -1.92
LIM2P55344 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.06□□□□□ -1.92
LIM2P55344 USP9YP11-201ENST00000427537 717 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.06□□□□□ -1.92
LIM2P55344 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LIM2P55344 VN1R10P-201ENST00000447106 875 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.06□□□□□ -1.92
LIM2P55344 SLC31A1P1-201ENST00000451221 567 ntBASIC3.06□□□□□ -1.92
LIM2P55344 USP9YP34-201ENST00000453983 808 ntBASIC3.06□□□□□ -1.92
LIM2P55344 BTF3P5-201ENST00000457252 467 ntBASIC3.06□□□□□ -1.92
LIM2P55344 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LIM2P55344 RPL32P34-201ENST00000486380 400 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AC134050.1-201ENST00000495088 933 ntBASIC3.06□□□□□ -1.92
LIM2P55344 TXNP6-201ENST00000510190 310 ntBASIC3.06□□□□□ -1.92
LIM2P55344 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.06□□□□□ -1.92
LIM2P55344 HSPA8P13-201ENST00000523715 472 ntBASIC3.06□□□□□ -1.92
LIM2P55344 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.06□□□□□ -1.92
LIM2P55344 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.06□□□□□ -1.92
LIM2P55344 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.06□□□□□ -1.92
LIM2P55344 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LIM2P55344 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.06□□□□□ -1.92
LIM2P55344 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LIM2P55344 EEF1B2P4-201ENST00000551398 348 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.06□□□□□ -1.92
LIM2P55344 HSPE1P3-201ENST00000559254 309 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AC106754.1-201ENST00000562632 1513 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AC099786.3-201ENST00000565735 1410 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AC109315.1-201ENST00000584143 1347 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AC080013.4-201ENST00000607624 649 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AC006329.2-201ENST00000611491 394 ntBASIC3.06□□□□□ -1.92
LIM2P55344 MIR8058-201ENST00000615737 89 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AC006963.1-201ENST00000624003 1052 ntBASIC3.06□□□□□ -1.92
LIM2P55344 AC004777.1-201ENST00000624317 287 ntBASIC3.06□□□□□ -1.92
LIM2P55344 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
LIM2P55344 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LIM2P55344 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.06□□□□□ -1.92
LIM2P55344 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LIM2P55344 AC244517.1-201ENST00000606030 2086 ntBASIC3.05□□□□□ -1.92
LIM2P55344 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.05□□□□□ -1.92
LIM2P55344 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.05□□□□□ -1.92
LIM2P55344 GABPAP-201ENST00000419271 1356 ntBASIC3.05□□□□□ -1.92
LIM2P55344 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LIM2P55344 NACA3P-201ENST00000359690 648 ntBASIC3.05□□□□□ -1.92
LIM2P55344 RNU6-989P-201ENST00000362756 107 ntBASIC3.05□□□□□ -1.92
LIM2P55344 RNU4-68P-201ENST00000364314 141 ntBASIC3.05□□□□□ -1.92
LIM2P55344 RNU6-657P-201ENST00000383904 107 ntBASIC3.05□□□□□ -1.92
LIM2P55344 RNU6-1181P-201ENST00000384191 106 ntBASIC3.05□□□□□ -1.92
LIM2P55344 U3.29-201ENST00000391296 212 ntBASIC3.05□□□□□ -1.92
LIM2P55344 ARF4P3-201ENST00000397387 509 ntBASIC3.05□□□□□ -1.92
LIM2P55344 HSPE1P26-201ENST00000405341 275 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AL138880.1-201ENST00000405824 642 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AL590084.1-201ENST00000407885 387 ntBASIC3.05□□□□□ -1.92
LIM2P55344 RNA5SP120-201ENST00000410900 112 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.05□□□□□ -1.92
LIM2P55344 AL356320.2-201ENST00000417263 507 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC006960.1-201ENST00000419980 153 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC099677.1-201ENST00000420575 175 ntBASIC3.05□□□□□ -1.92
LIM2P55344 HSFY1P1-201ENST00000423928 1178 ntBASIC3.05□□□□□ -1.92
LIM2P55344 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.05□□□□□ -1.92
LIM2P55344 NANOGP2-201ENST00000435391 727 ntBASIC3.05□□□□□ -1.92
LIM2P55344 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.05□□□□□ -1.92
LIM2P55344 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.05□□□□□ -1.92
LIM2P55344 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.05□□□□□ -1.92
LIM2P55344 Z75741.1-201ENST00000446793 314 ntBASIC3.05□□□□□ -1.92
LIM2P55344 RPS24P6-201ENST00000452670 400 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AL445669.2-201ENST00000454425 421 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC092757.1-201ENST00000467293 467 ntBASIC3.05□□□□□ -1.92
LIM2P55344 TMED11P-201ENST00000479478 690 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.05□□□□□ -1.92
LIM2P55344 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.05□□□□□ -1.92
LIM2P55344 AL358832.1-201ENST00000497800 389 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC114981.1-201ENST00000503897 678 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC114967.1-201ENST00000504890 259 ntBASIC3.05□□□□□ -1.92
LIM2P55344 TPT1P8-201ENST00000510120 555 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.05□□□□□ -1.92
LIM2P55344 SLC2A13P1-201ENST00000531560 322 ntBASIC3.05□□□□□ -1.92
LIM2P55344 PDCL2P2-201ENST00000533651 189 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.05□□□□□ -1.92
LIM2P55344 AADACP1-206ENST00000561502 1193 ntBASIC3.05□□□□□ -1.92
LIM2P55344 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.05□□□□□ -1.92
LIM2P55344 MIR2682-201ENST00000580305 110 ntBASIC3.05□□□□□ -1.92
LIM2P55344 MIR4637-201ENST00000582405 84 ntBASIC3.05□□□□□ -1.92
LIM2P55344 BNIP3P40-201ENST00000596017 556 ntBASIC3.05□□□□□ -1.92
LIM2P55344 AC245036.5-201ENST00000596330 847 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms