Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 RPS4XP7-201ENST00000406274 780 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 RNU6-193P-201ENST00000410977 107 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-5P52952 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NKX2-5P52952 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.38□□□□□ -2.03
NKX2-5P52952 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.38□□□□□ -2.03
NKX2-5P52952 RPL27AP8-201ENST00000424277 446 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-5P52952 NDUFB4P6-201ENST00000436819 366 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 AC093156.1-201ENST00000440382 670 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-5P52952 AC011753.1-201ENST00000451001 220 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-5P52952 BX248409.1-201ENST00000455497 255 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 SNORD105B-201ENST00000458770 79 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 U8.18-201ENST00000459285 133 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 AC133134.1-201ENST00000466800 359 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 RPS15AP34-201ENST00000487776 387 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 RN7SKP18-201ENST00000516005 275 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.38□□□□□ -2.03
NKX2-5P52952 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-5P52952 AP003102.1-201ENST00000525638 661 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-5P52952 LSM6P2-201ENST00000552208 177 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-5P52952 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-5P52952 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-5P52952 AL353748.2-201ENST00000622148 471 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-5P52952 CYP3A51P-201ENST00000633513 256 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 MIR203B-201ENST00000636080 86 ntBASIC2.38□□□□□ -2.03
NKX2-5P52952 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NKX2-5P52952 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-5P52952 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-5P52952 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-5P52952 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
NKX2-5P52952 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-5P52952 AC130650.2-201ENST00000618736 2403 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-5P52952 AL355596.1-201ENST00000565399 3996 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 SET-203ENST00000372688 801 ntTSL 2 BASIC2.37□□□□□ -2.03
NKX2-5P52952 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.37□□□□□ -2.03
NKX2-5P52952 SNORA56-201ENST00000383966 129 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 RNU6-921P-201ENST00000384361 107 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 HMGB3P31-201ENST00000413333 595 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.37□□□□□ -2.03
NKX2-5P52952 AC063979.1-201ENST00000415539 377 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX2-5P52952 AL389915.1-201ENST00000422463 466 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 RPP40P1-201ENST00000426762 456 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.37□□□□□ -2.03
NKX2-5P52952 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.37□□□□□ -2.03
NKX2-5P52952 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX2-5P52952 RPS15AP7-201ENST00000439294 405 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-5P52952 AL589880.1-201ENST00000448271 287 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 ELOCP23-201ENST00000452014 332 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.37□□□□□ -2.03
NKX2-5P52952 RBM43P1-201ENST00000476891 1081 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 MRPL42P6-201ENST00000486397 371 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 NAMPTP2-201ENST00000505629 1115 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 NPM1P41-201ENST00000512920 831 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.37□□□□□ -2.03
NKX2-5P52952 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.37□□□□□ -2.03
NKX2-5P52952 SNORA70.16-201ENST00000516390 95 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.37□□□□□ -2.03
NKX2-5P52952 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.37□□□□□ -2.03
NKX2-5P52952 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX2-5P52952 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.37□□□□□ -2.03
NKX2-5P52952 RPL21P12-201ENST00000559810 515 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 MIR3605-201ENST00000583214 100 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 MIR4276-201ENST00000584832 70 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX2-5P52952 AC012493.2-201ENST00000595083 291 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.37□□□□□ -2.03
NKX2-5P52952 AP002826.1-201ENST00000608835 315 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 AC034102.8-201ENST00000615146 484 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 AC027309.3-201ENST00000623419 351 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 ZNF663P-202ENST00000641770 1131 ntBASIC2.37□□□□□ -2.03
NKX2-5P52952 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.37□□□□□ -2.03
NKX2-5P52952 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
NKX2-5P52952 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-5P52952 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX2-5P52952 MTCO1P18-201ENST00000455518 1419 ntBASIC2.36□□□□□ -2.03
NKX2-5P52952 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NKX2-5P52952 AL359837.1-201ENST00000381357 287 ntBASIC2.36□□□□□ -2.03
NKX2-5P52952 RNA5SP210-201ENST00000391034 120 ntBASIC2.36□□□□□ -2.03
NKX2-5P52952 RNA5SP354-201ENST00000391247 136 ntBASIC2.36□□□□□ -2.03
NKX2-5P52952 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NKX2-5P52952 Z75741.2-201ENST00000417272 1167 ntBASIC2.36□□□□□ -2.03
NKX2-5P52952 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.36□□□□□ -2.03
NKX2-5P52952 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX2-5P52952 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX2-5P52952 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.36□□□□□ -2.03
NKX2-5P52952 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX2-5P52952 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX2-5P52952 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX2-5P52952 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX2-5P52952 OR4P1P-201ENST00000530808 1136 ntBASIC2.36□□□□□ -2.03
NKX2-5P52952 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms