Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.6□□□□□ -1.83
PDX1P52945 AC090877.1-201ENST00000561418 344 ntBASIC3.6□□□□□ -1.83
PDX1P52945 AC090616.2-202ENST00000584248 222 ntBASIC3.6□□□□□ -1.83
PDX1P52945 AL669831.4-202ENST00000590817 238 ntBASIC3.6□□□□□ -1.83
PDX1P52945 AL109653.1-201ENST00000603091 248 ntBASIC3.6□□□□□ -1.83
PDX1P52945 SNORA62.6-201ENST00000606322 83 ntBASIC3.6□□□□□ -1.83
PDX1P52945 AC018816.2-201ENST00000621460 353 ntBASIC3.6□□□□□ -1.83
PDX1P52945 AC078883.4-201ENST00000623218 367 ntBASIC3.6□□□□□ -1.83
PDX1P52945 AC243312.2-201ENST00000623340 601 ntBASIC3.6□□□□□ -1.83
PDX1P52945 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.6□□□□□ -1.83
PDX1P52945 AL392088.2-201ENST00000637607 285 ntBASIC3.6□□□□□ -1.83
PDX1P52945 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDX1P52945 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDX1P52945 MTND5P1-201ENST00000445440 1375 ntBASIC3.6□□□□□ -1.83
PDX1P52945 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.6□□□□□ -1.83
PDX1P52945 AC007390.2-201ENST00000606229 3803 ntBASIC3.6□□□□□ -1.83
PDX1P52945 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.6□□□□□ -1.83
PDX1P52945 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PDX1P52945 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDX1P52945 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDX1P52945 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.59□□□□□ -1.83
PDX1P52945 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.59□□□□□ -1.83
PDX1P52945 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDX1P52945 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDX1P52945 RN7SKP44-201ENST00000363602 316 ntBASIC3.59□□□□□ -1.83
PDX1P52945 RNU6-553P-201ENST00000364047 96 ntBASIC3.59□□□□□ -1.83
PDX1P52945 RNU6-253P-201ENST00000384730 105 ntBASIC3.59□□□□□ -1.83
PDX1P52945 MIR124-3-201ENST00000384866 87 ntBASIC3.59□□□□□ -1.83
PDX1P52945 MT-TC-201ENST00000387405 66 ntBASIC3.59□□□□□ -1.83
PDX1P52945 RNU6-952P-201ENST00000391164 108 ntBASIC3.59□□□□□ -1.83
PDX1P52945 RNA5SP56-201ENST00000410277 118 ntBASIC3.59□□□□□ -1.83
PDX1P52945 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.59□□□□□ -1.83
PDX1P52945 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AC009518.2-201ENST00000418056 731 ntBASIC3.59□□□□□ -1.83
PDX1P52945 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AL365203.2-201ENST00000423444 196 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.59□□□□□ -1.83
PDX1P52945 CYCSP4-201ENST00000429682 331 ntBASIC3.59□□□□□ -1.83
PDX1P52945 MTND1P20-201ENST00000430341 950 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AL365396.1-201ENST00000430854 671 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.59□□□□□ -1.83
PDX1P52945 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.59□□□□□ -1.83
PDX1P52945 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.59□□□□□ -1.83
PDX1P52945 SNORD108-201ENST00000459332 71 ntBASIC3.59□□□□□ -1.83
PDX1P52945 BZW1P2-201ENST00000473537 826 ntBASIC3.59□□□□□ -1.83
PDX1P52945 S100A11P1-201ENST00000477525 312 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AC090453.1-201ENST00000495560 436 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.59□□□□□ -1.83
PDX1P52945 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.59□□□□□ -1.83
PDX1P52945 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.59□□□□□ -1.83
PDX1P52945 AC118465.1-201ENST00000513820 1271 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.59□□□□□ -1.83
PDX1P52945 RNA5SP208-201ENST00000516156 78 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.59□□□□□ -1.83
PDX1P52945 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.59□□□□□ -1.83
PDX1P52945 AL139174.1-201ENST00000531489 886 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.59□□□□□ -1.83
PDX1P52945 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.59□□□□□ -1.83
PDX1P52945 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDX1P52945 AC141257.3-201ENST00000572906 215 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AC011260.1-201ENST00000578420 472 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.59□□□□□ -1.83
PDX1P52945 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.59□□□□□ -1.83
PDX1P52945 AC020914.4-201ENST00000597690 277 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AC004908.3-201ENST00000610248 625 ntBASIC3.59□□□□□ -1.83
PDX1P52945 MIR486-1-201ENST00000612171 68 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AL603755.1-201ENST00000619504 163 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AL031667.3-201ENST00000620124 655 ntBASIC3.59□□□□□ -1.83
PDX1P52945 AC040168.1-201ENST00000623594 991 ntBASIC3.59□□□□□ -1.83
PDX1P52945 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.59□□□□□ -1.83
PDX1P52945 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.59□□□□□ -1.83
PDX1P52945 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.59□□□□□ -1.83
PDX1P52945 DDX43P2-201ENST00000604753 1354 ntBASIC3.59□□□□□ -1.83
PDX1P52945 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PDX1P52945 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.59□□□□□ -1.84
PDX1P52945 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PDX1P52945 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PDX1P52945 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
PDX1P52945 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.58□□□□□ -1.84
PDX1P52945 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDX1P52945 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDX1P52945 RPL23AP57-201ENST00000332361 466 ntBASIC3.58□□□□□ -1.84
PDX1P52945 RNA5SP322-201ENST00000363617 119 ntBASIC3.58□□□□□ -1.84
PDX1P52945 RNU6-660P-201ENST00000364566 109 ntBASIC3.58□□□□□ -1.84
PDX1P52945 Y_RNA.302-201ENST00000364997 102 ntBASIC3.58□□□□□ -1.84
PDX1P52945 U3.15-201ENST00000365398 212 ntBASIC3.58□□□□□ -1.84
PDX1P52945 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDX1P52945 MIR218-2-201ENST00000385006 110 ntBASIC3.58□□□□□ -1.84
PDX1P52945 TPMTP2-201ENST00000414372 726 ntBASIC3.58□□□□□ -1.84
PDX1P52945 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.58□□□□□ -1.84
PDX1P52945 AC093698.1-201ENST00000423843 571 ntBASIC3.58□□□□□ -1.84
PDX1P52945 PSMA6P3-201ENST00000428242 164 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.58□□□□□ -1.84
PDX1P52945 RPL23AP74-201ENST00000437246 471 ntBASIC3.58□□□□□ -1.84
PDX1P52945 SNORA71B-202ENST00000439232 272 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.58□□□□□ -1.84
PDX1P52945 MTCO3P16-201ENST00000454456 754 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.58□□□□□ -1.84
PDX1P52945 BX322784.1-201ENST00000455793 1077 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AC008155.2-201ENST00000464337 397 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms