Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 Y_RNA.112-201ENST00000363250 102 ntBASIC5.58□□□□□ -1.52
USP11P51784 U3.12-201ENST00000364498 214 ntBASIC5.58□□□□□ -1.52
USP11P51784 RNU4-48P-201ENST00000365559 182 ntBASIC5.58□□□□□ -1.52
USP11P51784 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.58□□□□□ -1.52
USP11P51784 SNORD37.1-201ENST00000390968 65 ntBASIC5.58□□□□□ -1.52
USP11P51784 MIR548F5-201ENST00000408421 86 ntBASIC5.58□□□□□ -1.52
USP11P51784 CTSL3P-202ENST00000412179 788 ntBASIC5.58□□□□□ -1.52
USP11P51784 AC008280.1-201ENST00000418851 412 ntBASIC5.58□□□□□ -1.52
USP11P51784 AC104333.2-201ENST00000422630 192 ntBASIC5.58□□□□□ -1.52
USP11P51784 RPL7L1P10-201ENST00000427790 463 ntBASIC5.58□□□□□ -1.52
USP11P51784 HMGB3P11-201ENST00000440127 604 ntBASIC5.58□□□□□ -1.52
USP11P51784 AC000111.2-201ENST00000448200 210 ntBASIC5.58□□□□□ -1.52
USP11P51784 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.58□□□□□ -1.52
USP11P51784 HMGB1P30-201ENST00000492455 606 ntBASIC5.58□□□□□ -1.52
USP11P51784 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.58□□□□□ -1.52
USP11P51784 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.58□□□□□ -1.52
USP11P51784 RNU6-1088P-201ENST00000516850 104 ntBASIC5.58□□□□□ -1.52
USP11P51784 MYL12AP1-201ENST00000518490 515 ntBASIC5.58□□□□□ -1.52
USP11P51784 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.58□□□□□ -1.52
USP11P51784 AC103843.2-201ENST00000530523 682 ntBASIC5.58□□□□□ -1.52
USP11P51784 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.58□□□□□ -1.52
USP11P51784 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.58□□□□□ -1.52
USP11P51784 MIR3942-201ENST00000585264 109 ntBASIC5.58□□□□□ -1.52
USP11P51784 AL353997.4-201ENST00000586196 166 ntBASIC5.58□□□□□ -1.52
USP11P51784 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.58□□□□□ -1.52
USP11P51784 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.58□□□□□ -1.52
USP11P51784 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.58□□□□□ -1.52
USP11P51784 AC020910.3-201ENST00000603701 874 ntBASIC5.58□□□□□ -1.52
USP11P51784 AC005014.2-201ENST00000607795 599 ntBASIC5.58□□□□□ -1.52
USP11P51784 AC092807.2-201ENST00000609367 243 ntBASIC5.58□□□□□ -1.52
USP11P51784 RMST_9.1-201ENST00000619945 193 ntBASIC5.58□□□□□ -1.52
USP11P51784 AC087385.3-201ENST00000620477 187 ntBASIC5.58□□□□□ -1.52
USP11P51784 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP11P51784 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
USP11P51784 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.58□□□□□ -1.52
USP11P51784 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP11P51784 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP11P51784 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.58□□□□□ -1.52
USP11P51784 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.58□□□□□ -1.52
USP11P51784 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
USP11P51784 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP11P51784 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
USP11P51784 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP11P51784 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.57□□□□□ -1.52
USP11P51784 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP11P51784 RNA5SP443-201ENST00000363083 132 ntBASIC5.57□□□□□ -1.52
USP11P51784 Y_RNA.367-201ENST00000365544 101 ntBASIC5.57□□□□□ -1.52
USP11P51784 RNU6-921P-201ENST00000384361 107 ntBASIC5.57□□□□□ -1.52
USP11P51784 MIR585-201ENST00000384887 94 ntBASIC5.57□□□□□ -1.52
USP11P51784 MIR1302-3-201ENST00000408128 138 ntBASIC5.57□□□□□ -1.52
USP11P51784 RNU6-985P-201ENST00000410182 104 ntBASIC5.57□□□□□ -1.52
USP11P51784 RNU6-370P-201ENST00000411008 104 ntBASIC5.57□□□□□ -1.52
USP11P51784 RPS12P24-201ENST00000412619 387 ntBASIC5.57□□□□□ -1.52
USP11P51784 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.57□□□□□ -1.52
USP11P51784 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.57□□□□□ -1.52
USP11P51784 AL591212.2-201ENST00000433923 257 ntBASIC5.57□□□□□ -1.52
USP11P51784 AC093414.1-201ENST00000434712 514 ntBASIC5.57□□□□□ -1.52
USP11P51784 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.57□□□□□ -1.52
USP11P51784 HMGN3P1-201ENST00000453847 193 ntBASIC5.57□□□□□ -1.52
USP11P51784 AL356981.1-201ENST00000454879 684 ntBASIC5.57□□□□□ -1.52
USP11P51784 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP11P51784 AP1S2P1-201ENST00000457344 379 ntBASIC5.57□□□□□ -1.52
USP11P51784 MTCO3P2-201ENST00000457365 171 ntBASIC5.57□□□□□ -1.52
USP11P51784 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.57□□□□□ -1.52
USP11P51784 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.57□□□□□ -1.52
USP11P51784 AC021146.1-201ENST00000511202 716 ntBASIC5.57□□□□□ -1.52
USP11P51784 RN7SKP219-201ENST00000516825 296 ntBASIC5.57□□□□□ -1.52
USP11P51784 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP11P51784 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.57□□□□□ -1.52
USP11P51784 AC008269.2-201ENST00000561915 1105 ntBASIC5.57□□□□□ -1.52
USP11P51784 AL390726.5-202ENST00000564800 256 ntBASIC5.57□□□□□ -1.52
USP11P51784 MIR3934-201ENST00000579806 107 ntBASIC5.57□□□□□ -1.52
USP11P51784 MIR3146-201ENST00000580367 79 ntBASIC5.57□□□□□ -1.52
USP11P51784 AC233702.9-201ENST00000581528 203 ntBASIC5.57□□□□□ -1.52
USP11P51784 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.57□□□□□ -1.52
USP11P51784 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.57□□□□□ -1.52
USP11P51784 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.57□□□□□ -1.52
USP11P51784 U4.1-201ENST00000620349 87 ntBASIC5.57□□□□□ -1.52
USP11P51784 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.57□□□□□ -1.52
USP11P51784 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP11P51784 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
USP11P51784 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP11P51784 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP11P51784 AP001350.1-201ENST00000601906 1524 ntBASIC5.57□□□□□ -1.52
USP11P51784 AC008758.3-201ENST00000507003 1829 ntBASIC5.57□□□□□ -1.52
USP11P51784 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP11P51784 AC112198.2-201ENST00000426589 6996 ntBASIC5.57□□□□□ -1.52
USP11P51784 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP11P51784 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
USP11P51784 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
USP11P51784 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP11P51784 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.56□□□□□ -1.52
USP11P51784 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
USP11P51784 AC016769.3-201ENST00000396562 315 ntBASIC5.56□□□□□ -1.52
USP11P51784 AL357515.1-201ENST00000402967 542 ntBASIC5.56□□□□□ -1.52
USP11P51784 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.56□□□□□ -1.52
USP11P51784 TBCAP2-201ENST00000416175 326 ntBASIC5.56□□□□□ -1.52
USP11P51784 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.56□□□□□ -1.52
USP11P51784 RPS20P5-201ENST00000434808 360 ntBASIC5.56□□□□□ -1.52
USP11P51784 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms