Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC106858.1-201ENST00000637497 429 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 CRYM-AS1-204ENST00000637983 556 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 TAB3P1-202ENST00000452645 1634 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC097714.1-201ENST00000511272 1647 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC092326.2-201ENST00000624772 1561 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 RPS4XP5-202ENST00000449995 1334 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 MIR135A2-201ENST00000384854 100 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 MIR218-2-201ENST00000385006 110 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 SNORA48.8-201ENST00000391324 134 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 RPL30P2-201ENST00000414021 291 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC009237.5-201ENST00000414271 501 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AL449283.1-202ENST00000418249 604 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 HSPE1P1-201ENST00000421494 318 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 USP9YP36-201ENST00000424581 829 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 RPL21P40-201ENST00000428586 483 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC092641.1-201ENST00000440229 772 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 HSPE1P28-201ENST00000443139 211 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 PDSS1P2-201ENST00000449397 678 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC140076.1-201ENST00000449897 361 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AL353691.1-201ENST00000451332 387 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 RBMY2UP-201ENST00000453474 324 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 SNORA70.16-201ENST00000516390 95 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC022861.1-201ENST00000522981 663 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 FAM60DP-201ENST00000524174 632 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 SLC2A13P1-201ENST00000531560 322 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 TGIF1P1-201ENST00000558095 802 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC055876.1-202ENST00000567053 138 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 OR4K8P-201ENST00000578842 1048 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 MIR4444-1-201ENST00000581696 74 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 MIR4444-2-201ENST00000584390 74 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 BNIP3P33-201ENST00000598912 569 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 DUXAP11-201ENST00000603858 526 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 U3.45-201ENST00000607547 219 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AP002826.1-201ENST00000608835 315 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC018645.2-201ENST00000609151 472 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 TUG1_1.1-201ENST00000610654 145 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC025588.4-201ENST00000615802 908 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 MIR6076-201ENST00000617521 113 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AL138960.2-201ENST00000625145 535 ntBASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPA1P20036 AC032011.1-201ENST00000611703 1549 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 SNORA40.2-201ENST00000390847 128 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 RNA5SP171-201ENST00000391071 115 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 EI24P2-201ENST00000397776 1076 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 RPS4XP3-201ENST00000398541 413 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 RSL24D1P1-201ENST00000404972 493 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 RNA5SP38-201ENST00000410750 119 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC017079.2-201ENST00000416102 485 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AP000907.1-201ENST00000428428 510 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 ATP5JP1-201ENST00000431631 322 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 MTND2P20-201ENST00000440805 661 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 RPL21P23-201ENST00000446654 460 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 RPL23AP67-201ENST00000465341 474 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC020893.1-201ENST00000502452 580 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC006499.5-201ENST00000505037 514 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 VN1R104P-201ENST00000505115 1009 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC113347.3-201ENST00000509113 148 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 SNORA31.1-201ENST00000515993 133 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 SNORA31.5-201ENST00000516190 133 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AP001207.2-201ENST00000519490 539 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 MTND3P13-201ENST00000574391 343 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC015688.2-201ENST00000584523 262 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms