Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.16□□□□□ -2.06
VCANP13611 GAPDHP27-201ENST00000447427 1020 ntBASIC2.16□□□□□ -2.06
VCANP13611 AP000942.1-201ENST00000463969 747 ntBASIC2.16□□□□□ -2.06
VCANP13611 ATP5EP1-201ENST00000510257 156 ntBASIC2.16□□□□□ -2.06
VCANP13611 AP002748.2-201ENST00000528671 348 ntBASIC2.16□□□□□ -2.06
VCANP13611 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.16□□□□□ -2.06
VCANP13611 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VCANP13611 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
VCANP13611 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
VCANP13611 AL391987.6-201ENST00000305671 199 ntBASIC2.15□□□□□ -2.06
VCANP13611 Y_RNA.251-201ENST00000364551 99 ntBASIC2.15□□□□□ -2.06
VCANP13611 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.15□□□□□ -2.06
VCANP13611 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.15□□□□□ -2.06
VCANP13611 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.15□□□□□ -2.06
VCANP13611 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
VCANP13611 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.15□□□□□ -2.07
VCANP13611 AC017099.1-201ENST00000448261 1028 ntBASIC2.15□□□□□ -2.07
VCANP13611 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.15□□□□□ -2.07
VCANP13611 AC110588.1-201ENST00000559699 137 ntBASIC2.15□□□□□ -2.07
VCANP13611 MIR6733-201ENST00000635723 61 ntBASIC2.15□□□□□ -2.07
VCANP13611 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VCANP13611 AC093909.5-201ENST00000621839 1799 ntBASIC2.15□□□□□ -2.07
VCANP13611 RAD1P1-201ENST00000231383 813 ntBASIC2.15□□□□□ -2.07
VCANP13611 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.15□□□□□ -2.07
VCANP13611 AC003989.2-201ENST00000440224 169 ntBASIC2.15□□□□□ -2.07
VCANP13611 HMGB3P8-201ENST00000449709 577 ntBASIC2.15□□□□□ -2.07
VCANP13611 RPL21P71-201ENST00000465598 459 ntBASIC2.15□□□□□ -2.07
VCANP13611 AC019159.1-201ENST00000605094 187 ntBASIC2.15□□□□□ -2.07
VCANP13611 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.15□□□□□ -2.07
VCANP13611 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
VCANP13611 AL138878.1-201ENST00000405131 347 ntBASIC2.14□□□□□ -2.07
VCANP13611 TPMTP3-201ENST00000411928 735 ntBASIC2.14□□□□□ -2.07
VCANP13611 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.14□□□□□ -2.07
VCANP13611 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VCANP13611 TMEM248P1-201ENST00000510579 951 ntBASIC2.14□□□□□ -2.07
VCANP13611 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.14□□□□□ -2.07
VCANP13611 HMGN2P28-201ENST00000606102 262 ntBASIC2.14□□□□□ -2.07
VCANP13611 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
VCANP13611 MTCO1P4-201ENST00000520516 1409 ntBASIC2.14□□□□□ -2.07
VCANP13611 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
VCANP13611 AC020633.1-201ENST00000468439 2247 ntBASIC2.14□□□□□ -2.07
VCANP13611 MIR598-201ENST00000384868 97 ntBASIC2.14□□□□□ -2.07
VCANP13611 SNORA67.5-201ENST00000391036 107 ntBASIC2.14□□□□□ -2.07
VCANP13611 AC013404.1-201ENST00000413068 249 ntBASIC2.14□□□□□ -2.07
VCANP13611 AL121877.1-201ENST00000453704 622 ntBASIC2.14□□□□□ -2.07
VCANP13611 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.14□□□□□ -2.07
VCANP13611 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VCANP13611 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VCANP13611 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
VCANP13611 RNA5SP129-201ENST00000410276 118 ntBASIC2.13□□□□□ -2.07
VCANP13611 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.13□□□□□ -2.07
VCANP13611 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.13□□□□□ -2.07
VCANP13611 LINC00888-204ENST00000487386 421 ntBASIC2.13□□□□□ -2.07
VCANP13611 AC147055.1-201ENST00000509261 750 ntBASIC2.13□□□□□ -2.07
VCANP13611 AC067805.1-201ENST00000559344 470 ntBASIC2.13□□□□□ -2.07
VCANP13611 MIR8081-201ENST00000611533 95 ntBASIC2.13□□□□□ -2.07
VCANP13611 MIR6734-201ENST00000621166 68 ntBASIC2.13□□□□□ -2.07
VCANP13611 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
VCANP13611 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
VCANP13611 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VCANP13611 AL645939.1-201ENST00000453429 797 ntBASIC2.13□□□□□ -2.07
VCANP13611 NAMPTP2-201ENST00000505629 1115 ntBASIC2.13□□□□□ -2.07
VCANP13611 AP005660.1-201ENST00000522972 293 ntBASIC2.13□□□□□ -2.07
VCANP13611 AC008015.1-201ENST00000555505 465 ntBASIC2.13□□□□□ -2.07
VCANP13611 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.13□□□□□ -2.07
VCANP13611 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VCANP13611 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.13□□□□□ -2.07
VCANP13611 BX322784.1-201ENST00000455793 1077 ntBASIC2.13□□□□□ -2.07
VCANP13611 RNU6-1231P-201ENST00000517185 103 ntBASIC2.13□□□□□ -2.07
VCANP13611 7SK.7-201ENST00000603504 247 ntBASIC2.13□□□□□ -2.07
VCANP13611 AC107021.2-201ENST00000567714 2095 ntBASIC2.13□□□□□ -2.07
VCANP13611 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VCANP13611 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.13□□□□□ -2.07
VCANP13611 GCNT6-201ENST00000379591 934 ntBASIC2.12□□□□□ -2.07
VCANP13611 VN1R31P-201ENST00000417498 730 ntBASIC2.12□□□□□ -2.07
VCANP13611 UBE2V1P6-201ENST00000430840 422 ntBASIC2.12□□□□□ -2.07
VCANP13611 AL590762.3-201ENST00000436372 640 ntBASIC2.12□□□□□ -2.07
VCANP13611 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.12□□□□□ -2.07
VCANP13611 AC009237.8-201ENST00000445492 379 ntBASIC2.12□□□□□ -2.07
VCANP13611 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.12□□□□□ -2.07
VCANP13611 SNRPFP4-201ENST00000456366 242 ntBASIC2.12□□□□□ -2.07
VCANP13611 HMGN1P7-201ENST00000491722 313 ntBASIC2.12□□□□□ -2.07
VCANP13611 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VCANP13611 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.12□□□□□ -2.07
VCANP13611 MIR21-201ENST00000362134 72 ntBASIC2.12□□□□□ -2.07
VCANP13611 MTATP6P11-201ENST00000428071 670 ntBASIC2.12□□□□□ -2.07
VCANP13611 HIGD1AP10-201ENST00000527837 282 ntBASIC2.12□□□□□ -2.07
VCANP13611 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.12□□□□□ -2.07
VCANP13611 AC136443.5-201ENST00000603741 370 ntBASIC2.12□□□□□ -2.07
VCANP13611 AL606537.1-201ENST00000607258 2011 ntBASIC2.12□□□□□ -2.07
VCANP13611 MIR6766-201ENST00000622641 72 ntBASIC2.12□□□□□ -2.07
VCANP13611 MIR6767-201ENST00000637302 66 ntBASIC2.12□□□□□ -2.07
VCANP13611 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VCANP13611 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.12□□□□□ -2.07
VCANP13611 CACYBPP1-201ENST00000438592 684 ntBASIC2.12□□□□□ -2.07
VCANP13611 AC004263.1-201ENST00000479327 332 ntBASIC2.12□□□□□ -2.07
VCANP13611 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.12□□□□□ -2.07
VCANP13611 AC096720.1-201ENST00000604441 183 ntBASIC2.12□□□□□ -2.07
VCANP13611 BX664608.1-201ENST00000610519 487 ntBASIC2.12□□□□□ -2.07
VCANP13611 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms