Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC074029.4-201ENST00000624796 1859 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL6A2P12110 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL6A2P12110 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL6A2P12110 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL6A2P12110 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.82□□□□□ -1.64
COL6A2P12110 NXPH1-205ENST00000602349 1953 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.82□□□□□ -1.64
COL6A2P12110 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL6A2P12110 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.82□□□□□ -1.64
COL6A2P12110 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL6A2P12110 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.82□□□□□ -1.64
COL6A2P12110 Y_RNA.460-201ENST00000384255 102 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 MIR558-201ENST00000384920 94 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AL356057.2-201ENST00000403318 432 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AL591416.1-201ENST00000404015 867 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AL162578.1-201ENST00000406202 378 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.82□□□□□ -1.64
COL6A2P12110 RPL30P3-201ENST00000424262 333 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.82□□□□□ -1.64
COL6A2P12110 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.82□□□□□ -1.64
COL6A2P12110 ATP5JP1-201ENST00000431631 322 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 RPS27P18-201ENST00000431701 247 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.82□□□□□ -1.64
COL6A2P12110 Z95327.1-201ENST00000446082 482 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AC000111.2-201ENST00000448200 210 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AC010733.1-201ENST00000451515 401 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.82□□□□□ -1.64
COL6A2P12110 RN7SL610P-201ENST00000463845 291 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 RPL5P30-201ENST00000465511 891 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.82□□□□□ -1.64
COL6A2P12110 RN7SL558P-201ENST00000497468 299 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AC020893.1-201ENST00000502452 580 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 RNU6-709P-201ENST00000517257 104 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.82□□□□□ -1.64
COL6A2P12110 SUB1P1-201ENST00000524415 382 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.82□□□□□ -1.64
COL6A2P12110 AC023050.3-201ENST00000541142 333 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.82□□□□□ -1.64
COL6A2P12110 AL442663.2-201ENST00000554385 511 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AC087477.6-201ENST00000559595 843 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 RPL21P12-201ENST00000559810 515 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AC011477.5-201ENST00000586571 259 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.82□□□□□ -1.64
COL6A2P12110 AC113194.1-201ENST00000606037 500 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AC105429.2-201ENST00000610567 517 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AC130324.3-201ENST00000614165 542 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AL590099.1-201ENST00000615276 138 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 MIR6719-201ENST00000622428 87 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 AC100810.6-201ENST00000638068 285 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL6A2P12110 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL6A2P12110 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL6A2P12110 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL6A2P12110 MAPK10-286ENST00000641208 8747 ntBASIC4.82□□□□□ -1.64
COL6A2P12110 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.81□□□□□ -1.64
COL6A2P12110 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL6A2P12110 SNURFL-201ENST00000309296 343 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 Y_RNA.22-201ENST00000362492 102 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 RNVU1-3-201ENST00000364313 161 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 SNORD51-201ENST00000384320 80 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 RNU6-332P-201ENST00000391193 108 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 RNU6-510P-201ENST00000391239 108 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AL357515.1-201ENST00000402967 542 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 FAT1P1-201ENST00000406588 507 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 CHIAP3-201ENST00000423668 1133 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.81□□□□□ -1.64
COL6A2P12110 RPL35AP12-201ENST00000425362 338 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.81□□□□□ -1.64
COL6A2P12110 AL365400.1-201ENST00000431854 640 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 RPL34P20-201ENST00000442771 351 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 RPL7P12-201ENST00000446719 750 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AL118496.2-201ENST00000448300 230 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC073415.1-201ENST00000449240 153 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC087385.1-201ENST00000475062 312 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.81□□□□□ -1.64
COL6A2P12110 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.81□□□□□ -1.64
COL6A2P12110 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.81□□□□□ -1.64
COL6A2P12110 HMGN1P13-201ENST00000505795 138 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC114797.1-201ENST00000514003 728 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC022690.1-201ENST00000526681 550 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.81□□□□□ -1.64
COL6A2P12110 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.81□□□□□ -1.64
COL6A2P12110 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.81□□□□□ -1.64
COL6A2P12110 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.81□□□□□ -1.64
COL6A2P12110 AC078795.3-201ENST00000602913 472 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AL355812.1-201ENST00000603215 216 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC010591.1-201ENST00000603941 649 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC004908.2-201ENST00000609090 574 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC079684.1-201ENST00000621405 437 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 MIR6730-201ENST00000622213 67 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 AC090574.1-201ENST00000623186 233 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COL6A2P12110 AL049555.1-201ENST00000562834 1933 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms