Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.63□□□□□ -1.51
RARAP10276 AL445363.3-201ENST00000623080 671 ntBASIC5.63□□□□□ -1.51
RARAP10276 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RARAP10276 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.63□□□□□ -1.51
RARAP10276 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RARAP10276 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
RARAP10276 AL022311.1-201ENST00000623726 19416 ntBASIC5.63□□□□□ -1.51
RARAP10276 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RARAP10276 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RARAP10276 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
RARAP10276 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.62□□□□□ -1.51
RARAP10276 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
RARAP10276 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RARAP10276 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.62□□□□□ -1.51
RARAP10276 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
RARAP10276 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
RARAP10276 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RARAP10276 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RARAP10276 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RARAP10276 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RARAP10276 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RARAP10276 RNU6-99P-201ENST00000364721 107 ntBASIC5.62□□□□□ -1.51
RARAP10276 Y_RNA.307-201ENST00000365022 117 ntBASIC5.62□□□□□ -1.51
RARAP10276 Y_RNA.404-201ENST00000383978 102 ntBASIC5.62□□□□□ -1.51
RARAP10276 SNORA48.4-201ENST00000391089 134 ntBASIC5.62□□□□□ -1.51
RARAP10276 CTSL3P-202ENST00000412179 788 ntBASIC5.62□□□□□ -1.51
RARAP10276 RPL30P2-201ENST00000414021 291 ntBASIC5.62□□□□□ -1.51
RARAP10276 COX5BP7-201ENST00000414780 274 ntBASIC5.62□□□□□ -1.51
RARAP10276 RPL7P10-201ENST00000417407 739 ntBASIC5.62□□□□□ -1.51
RARAP10276 AC069213.2-201ENST00000420238 366 ntBASIC5.62□□□□□ -1.51
RARAP10276 AC008267.5-201ENST00000424928 265 ntBASIC5.62□□□□□ -1.51
RARAP10276 RSL24D1P6-201ENST00000426934 401 ntBASIC5.62□□□□□ -1.51
RARAP10276 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.62□□□□□ -1.51
RARAP10276 AC105402.2-201ENST00000438503 358 ntBASIC5.62□□□□□ -1.51
RARAP10276 RPS24P13-201ENST00000442520 397 ntBASIC5.62□□□□□ -1.51
RARAP10276 AL161636.2-201ENST00000445179 927 ntBASIC5.62□□□□□ -1.51
RARAP10276 HMGB3P21-201ENST00000452483 547 ntBASIC5.62□□□□□ -1.51
RARAP10276 AC116533.1-201ENST00000459748 321 ntBASIC5.62□□□□□ -1.51
RARAP10276 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.62□□□□□ -1.51
RARAP10276 RPL21P8-201ENST00000465083 535 ntBASIC5.62□□□□□ -1.51
RARAP10276 RPS20P21-201ENST00000466859 343 ntBASIC5.62□□□□□ -1.51
RARAP10276 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RARAP10276 AC012123.2-201ENST00000485809 248 ntBASIC5.62□□□□□ -1.51
RARAP10276 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.62□□□□□ -1.51
RARAP10276 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.62□□□□□ -1.51
RARAP10276 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.62□□□□□ -1.51
RARAP10276 RNU6-513P-201ENST00000516104 104 ntBASIC5.62□□□□□ -1.51
RARAP10276 Y_RNA.708-201ENST00000516950 96 ntBASIC5.62□□□□□ -1.51
RARAP10276 SCARNA16.4-201ENST00000516956 187 ntBASIC5.62□□□□□ -1.51
RARAP10276 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.62□□□□□ -1.51
RARAP10276 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.62□□□□□ -1.51
RARAP10276 EIF4A2P5-201ENST00000529914 499 ntBASIC5.62□□□□□ -1.51
RARAP10276 AP004607.2-201ENST00000533949 322 ntBASIC5.62□□□□□ -1.51
RARAP10276 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.62□□□□□ -1.51
RARAP10276 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.62□□□□□ -1.51
RARAP10276 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.62□□□□□ -1.51
RARAP10276 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.62□□□□□ -1.51
RARAP10276 AC040958.1-201ENST00000561102 201 ntBASIC5.62□□□□□ -1.51
RARAP10276 AC015720.2-201ENST00000567709 334 ntBASIC5.62□□□□□ -1.51
RARAP10276 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.62□□□□□ -1.51
RARAP10276 AL365434.2-201ENST00000607979 234 ntBASIC5.62□□□□□ -1.51
RARAP10276 AC107871.2-201ENST00000612894 502 ntBASIC5.62□□□□□ -1.51
RARAP10276 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RARAP10276 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RARAP10276 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RARAP10276 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.62□□□□□ -1.51
RARAP10276 AL442128.2-201ENST00000620246 1824 ntBASIC5.62□□□□□ -1.51
RARAP10276 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.62□□□□□ -1.51
RARAP10276 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
RARAP10276 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RARAP10276 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.62□□□□□ -1.51
RARAP10276 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RARAP10276 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RARAP10276 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
RARAP10276 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RARAP10276 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.61□□□□□ -1.51
RARAP10276 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RARAP10276 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RARAP10276 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RARAP10276 RNA5SP234-201ENST00000363916 119 ntBASIC5.61□□□□□ -1.51
RARAP10276 RNU1-130P-201ENST00000363930 160 ntBASIC5.61□□□□□ -1.51
RARAP10276 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RARAP10276 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RARAP10276 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RARAP10276 NDUFS5P1-201ENST00000405668 289 ntBASIC5.61□□□□□ -1.51
RARAP10276 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RARAP10276 RNU6-387P-201ENST00000411331 105 ntBASIC5.61□□□□□ -1.51
RARAP10276 RNA5SP107-201ENST00000411358 122 ntBASIC5.61□□□□□ -1.51
RARAP10276 BX682237.1-201ENST00000415016 335 ntBASIC5.61□□□□□ -1.51
RARAP10276 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.61□□□□□ -1.51
RARAP10276 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.61□□□□□ -1.51
RARAP10276 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.61□□□□□ -1.51
RARAP10276 E2F6P2-201ENST00000420708 748 ntBASIC5.61□□□□□ -1.51
RARAP10276 GSTM5P1-201ENST00000434751 660 ntBASIC5.61□□□□□ -1.51
RARAP10276 AC005094.1-201ENST00000440420 368 ntBASIC5.61□□□□□ -1.51
RARAP10276 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.61□□□□□ -1.51
RARAP10276 AC105399.1-202ENST00000447303 205 ntBASIC5.61□□□□□ -1.51
RARAP10276 AC104634.1-201ENST00000452720 462 ntBASIC5.61□□□□□ -1.51
RARAP10276 RPL36AP13-201ENST00000457490 317 ntBASIC5.61□□□□□ -1.51
RARAP10276 CEACAMP4-201ENST00000457676 421 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms