Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AC096644.4-201ENST00000563417 2912 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 SNORA71.3-201ENST00000362582 128 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 RNA5SP393-201ENST00000363423 117 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 SNORA25.6-201ENST00000364121 118 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 SNORD115-48-201ENST00000364764 76 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 RNU6-444P-201ENST00000383988 108 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 ATP5F1P6-201ENST00000402768 767 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 RNU2-25P-201ENST00000411041 191 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 PAICSP7-201ENST00000419829 962 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 RPL21P32-201ENST00000419877 477 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 FNDC3CP-201ENST00000420795 1155 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AL606495.1-201ENST00000422100 813 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC096632.1-201ENST00000427395 310 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC022018.1-201ENST00000430685 241 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC112492.1-201ENST00000449607 712 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC090525.1-201ENST00000479116 478 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC006445.1-201ENST00000491925 405 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC015871.2-201ENST00000603605 948 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 YPEL5P2-201ENST00000605553 359 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AL355802.4-201ENST00000607635 548 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC140725.3-201ENST00000616193 880 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 OR8B1P-202ENST00000641132 1178 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC172P0C7W6 SGO1P2-201ENST00000429458 1589 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 MTND5P1-201ENST00000445440 1375 ntBASIC3.11□□□□□ -1.91
CCDC172P0C7W6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 RPL7P8-201ENST00000411964 730 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC073310.1-201ENST00000423226 1033 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 HMGN2P30-201ENST00000423237 256 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC083906.5-201ENST00000503722 328 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 SNORA9.3-201ENST00000516383 129 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 RPPH1-2P-201ENST00000516688 293 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 HPRT1P3-201ENST00000539521 576 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC004217.3-201ENST00000551552 878 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AL391156.1-201ENST00000554965 554 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 AC020895.1-201ENST00000595362 272 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 RPL23AP78-201ENST00000599928 470 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC172P0C7W6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 MTND2P41-201ENST00000637599 773 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 MTCO1P18-201ENST00000455518 1419 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 Z82195.2-201ENST00000612348 18351 ntBASIC3.1□□□□□ -1.91
CCDC172P0C7W6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 RNA5SP27-201ENST00000363839 119 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 MIR670-201ENST00000390142 98 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 MTND4LP20-201ENST00000402379 270 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 RPS3AP25-201ENST00000411660 793 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC244453.4-201ENST00000419150 388 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 RPS20P5-201ENST00000434808 360 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC127537.2-201ENST00000439258 465 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 MTCYBP34-201ENST00000439552 670 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC096751.1-202ENST00000502691 1067 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC009812.2-201ENST00000517657 457 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 HIGD1AP6-201ENST00000521833 279 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC090666.1-201ENST00000578241 445 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 MIR4429-201ENST00000580105 73 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC172P0C7W6 AC006539.2-201ENST00000601729 572 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 DUXAP3-201ENST00000603616 594 ntBASIC3.09□□□□□ -1.91
CCDC172P0C7W6 MIR6798-201ENST00000612887 67 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 452.3 ms