Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.01□□□□□ -2.09
CXCL1P09341 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CXCL1P09341 AC007336.1-201ENST00000576365 3828 ntBASIC2.01□□□□□ -2.09
CXCL1P09341 AC005412.1-201ENST00000580812 1049 ntBASIC2.01□□□□□ -2.09
CXCL1P09341 AC009303.3-201ENST00000591103 736 ntBASIC2.01□□□□□ -2.09
CXCL1P09341 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.01□□□□□ -2.09
CXCL1P09341 MIMT1-201ENST00000597105 1050 ntBASIC2.01□□□□□ -2.09
CXCL1P09341 U73023.1-201ENST00000603134 700 ntBASIC2.01□□□□□ -2.09
CXCL1P09341 AC024560.3-201ENST00000608482 349 ntBASIC2.01□□□□□ -2.09
CXCL1P09341 AL356863.1-201ENST00000623378 1080 ntBASIC2.01□□□□□ -2.09
CXCL1P09341 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.01□□□□□ -2.09
CXCL1P09341 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.01□□□□□ -2.09
CXCL1P09341 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.01□□□□□ -2.09
CXCL1P09341 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CXCL1P09341 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
CXCL1P09341 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CXCL1P09341 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CXCL1P09341 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CXCL1P09341 SNORA51.12-201ENST00000384448 134 ntBASIC2□□□□□ -2.09
CXCL1P09341 MIR183-201ENST00000384958 110 ntBASIC2□□□□□ -2.09
CXCL1P09341 MIR449B-201ENST00000384995 97 ntBASIC2□□□□□ -2.09
CXCL1P09341 PTMAP2-201ENST00000397627 327 ntBASIC2□□□□□ -2.09
CXCL1P09341 SSXP10-201ENST00000402595 565 ntBASIC2□□□□□ -2.09
CXCL1P09341 AC080125.1-201ENST00000414888 684 ntBASIC2□□□□□ -2.09
CXCL1P09341 AL513477.1-202ENST00000417061 214 ntBASIC2□□□□□ -2.09
CXCL1P09341 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2□□□□□ -2.09
CXCL1P09341 FO393419.3-201ENST00000428741 282 ntBASIC2□□□□□ -2.09
CXCL1P09341 RPS20P5-201ENST00000434808 360 ntBASIC2□□□□□ -2.09
CXCL1P09341 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2□□□□□ -2.09
CXCL1P09341 RPL23AP15-201ENST00000450202 459 ntBASIC2□□□□□ -2.09
CXCL1P09341 MRPL35P4-201ENST00000453682 566 ntBASIC2□□□□□ -2.09
CXCL1P09341 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2□□□□□ -2.09
CXCL1P09341 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2□□□□□ -2.09
CXCL1P09341 AC006445.1-201ENST00000491925 405 ntBASIC2□□□□□ -2.09
CXCL1P09341 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2□□□□□ -2.09
CXCL1P09341 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2□□□□□ -2.09
CXCL1P09341 GTF2IP9-201ENST00000502460 301 ntBASIC2□□□□□ -2.09
CXCL1P09341 AC096751.1-202ENST00000502691 1067 ntBASIC2□□□□□ -2.09
CXCL1P09341 SCGB1D5P-201ENST00000515134 247 ntBASIC2□□□□□ -2.09
CXCL1P09341 RPPH1-2P-201ENST00000516688 293 ntBASIC2□□□□□ -2.09
CXCL1P09341 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2□□□□□ -2.09
CXCL1P09341 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2□□□□□ -2.09
CXCL1P09341 AC074029.2-201ENST00000551045 634 ntBASIC2□□□□□ -2.09
CXCL1P09341 AC078814.3-201ENST00000553036 491 ntBASIC2□□□□□ -2.09
CXCL1P09341 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2□□□□□ -2.09
CXCL1P09341 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2□□□□□ -2.09
CXCL1P09341 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2□□□□□ -2.09
CXCL1P09341 AC009163.5-201ENST00000575421 637 ntBASIC2□□□□□ -2.09
CXCL1P09341 ISCA1P3-201ENST00000577104 373 ntBASIC2□□□□□ -2.09
CXCL1P09341 MIR4697-201ENST00000582977 78 ntBASIC2□□□□□ -2.09
CXCL1P09341 MIR4635-201ENST00000583759 79 ntBASIC2□□□□□ -2.09
CXCL1P09341 AL137843.1-201ENST00000605078 385 ntBASIC2□□□□□ -2.09
CXCL1P09341 AC245389.1-201ENST00000605141 529 ntBASIC2□□□□□ -2.09
CXCL1P09341 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2□□□□□ -2.09
CXCL1P09341 AC026422.1-201ENST00000623961 452 ntBASIC2□□□□□ -2.09
CXCL1P09341 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2□□□□□ -2.09
CXCL1P09341 U6.105-201ENST00000637379 88 ntBASIC2□□□□□ -2.09
CXCL1P09341 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2□□□□□ -2.09
CXCL1P09341 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CXCL1P09341 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CXCL1P09341 AC093536.2-201ENST00000565257 1406 ntBASIC2□□□□□ -2.09
CXCL1P09341 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CXCL1P09341 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CXCL1P09341 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CXCL1P09341 MIR627-201ENST00000384979 97 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 RNA5SP120-201ENST00000410900 112 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 RNU6-564P-201ENST00000410983 104 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AC096533.1-201ENST00000411645 353 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.99□□□□□ -2.09
CXCL1P09341 AC092447.6-201ENST00000414578 210 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 LINC01347-201ENST00000417964 355 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AL137014.1-201ENST00000420490 1226 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL1P09341 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.99□□□□□ -2.09
CXCL1P09341 RPL36P19-201ENST00000430744 301 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AC112220.1-201ENST00000434628 355 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.99□□□□□ -2.09
CXCL1P09341 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL1P09341 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.99□□□□□ -2.09
CXCL1P09341 CDC42P4-201ENST00000510507 563 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 MTCO3P44-201ENST00000510977 541 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 SNORA74D-201ENST00000516404 141 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 RN7SKP40-201ENST00000517211 242 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL1P09341 DUXAP2-201ENST00000519198 589 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL1P09341 CKS1BP7-201ENST00000522230 235 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AC007115.1-201ENST00000546853 234 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.99□□□□□ -2.09
CXCL1P09341 AP005205.1-201ENST00000563503 508 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.99□□□□□ -2.09
CXCL1P09341 AC090666.1-201ENST00000578241 445 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL1P09341 MIR5194-201ENST00000582634 120 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 MTCO3P22-201ENST00000603219 784 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 AC011374.2-201ENST00000607135 526 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
CXCL1P09341 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
CXCL1P09341 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CXCL1P09341 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms