Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RNA5SP307-201ENST00000362863 116 ntBASIC5.22□□□□□ -1.57
APPP05067 SNORA62-201ENST00000365493 153 ntBASIC5.22□□□□□ -1.57
APPP05067 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.22□□□□□ -1.57
APPP05067 RNU6-146P-201ENST00000384602 108 ntBASIC5.22□□□□□ -1.57
APPP05067 MIR195-201ENST00000385194 87 ntBASIC5.22□□□□□ -1.57
APPP05067 FCF1P10-201ENST00000407590 479 ntBASIC5.22□□□□□ -1.57
APPP05067 SNORA11F-201ENST00000408237 128 ntBASIC5.22□□□□□ -1.57
APPP05067 VDAC1P9-201ENST00000412766 841 ntBASIC5.22□□□□□ -1.57
APPP05067 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APPP05067 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.22□□□□□ -1.57
APPP05067 RPL30P16-201ENST00000419341 429 ntBASIC5.22□□□□□ -1.57
APPP05067 AC092832.1-201ENST00000422934 400 ntBASIC5.22□□□□□ -1.57
APPP05067 CHIAP3-201ENST00000423668 1133 ntBASIC5.22□□□□□ -1.57
APPP05067 DPPA2P1-201ENST00000428060 556 ntBASIC5.22□□□□□ -1.57
APPP05067 RPL23AP74-201ENST00000437246 471 ntBASIC5.22□□□□□ -1.57
APPP05067 SKP1P1-201ENST00000438081 489 ntBASIC5.22□□□□□ -1.57
APPP05067 AC114495.1-201ENST00000441274 436 ntBASIC5.22□□□□□ -1.57
APPP05067 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.22□□□□□ -1.57
APPP05067 AL671855.1-201ENST00000446875 1203 ntBASIC5.22□□□□□ -1.57
APPP05067 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APPP05067 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.22□□□□□ -1.57
APPP05067 RPS20P32-201ENST00000456044 356 ntBASIC5.22□□□□□ -1.57
APPP05067 AC005008.1-201ENST00000456151 612 ntBASIC5.22□□□□□ -1.57
APPP05067 AL672167.3-201ENST00000465951 960 ntBASIC5.22□□□□□ -1.57
APPP05067 RN7SL303P-201ENST00000469773 251 ntBASIC5.22□□□□□ -1.57
APPP05067 RBM43P1-201ENST00000476891 1081 ntBASIC5.22□□□□□ -1.57
APPP05067 AC108043.1-201ENST00000512696 574 ntBASIC5.22□□□□□ -1.57
APPP05067 SNORD116-26-201ENST00000516006 96 ntBASIC5.22□□□□□ -1.57
APPP05067 AC022616.6-201ENST00000520479 119 ntBASIC5.22□□□□□ -1.57
APPP05067 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.22□□□□□ -1.57
APPP05067 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.22□□□□□ -1.57
APPP05067 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.22□□□□□ -1.57
APPP05067 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.22□□□□□ -1.57
APPP05067 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APPP05067 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.22□□□□□ -1.57
APPP05067 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.22□□□□□ -1.57
APPP05067 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.22□□□□□ -1.57
APPP05067 AC009101.1-201ENST00000568135 242 ntBASIC5.22□□□□□ -1.57
APPP05067 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.22□□□□□ -1.57
APPP05067 RPL7P50-201ENST00000600588 727 ntBASIC5.22□□□□□ -1.57
APPP05067 AC010201.1-201ENST00000605051 540 ntBASIC5.22□□□□□ -1.57
APPP05067 AC103710.1-201ENST00000610003 901 ntBASIC5.22□□□□□ -1.57
APPP05067 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.22□□□□□ -1.57
APPP05067 AL356321.1-201ENST00000621360 228 ntBASIC5.22□□□□□ -1.57
APPP05067 AC079597.1-201ENST00000624306 508 ntBASIC5.22□□□□□ -1.57
APPP05067 AP000843.1-201ENST00000624880 701 ntBASIC5.22□□□□□ -1.57
APPP05067 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.22□□□□□ -1.57
APPP05067 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APPP05067 AC007529.1-201ENST00000418574 2178 ntBASIC5.22□□□□□ -1.57
APPP05067 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.22□□□□□ -1.57
APPP05067 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.22□□□□□ -1.57
APPP05067 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APPP05067 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APPP05067 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.57
APPP05067 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.21□□□□□ -1.57
APPP05067 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APPP05067 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APPP05067 MARK2P15-201ENST00000432204 2186 ntBASIC5.21□□□□□ -1.58
APPP05067 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
APPP05067 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APPP05067 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
APPP05067 RNA5SP175-201ENST00000364275 119 ntBASIC5.21□□□□□ -1.58
APPP05067 Y_RNA.381-201ENST00000365666 102 ntBASIC5.21□□□□□ -1.58
APPP05067 SNORD115.1-201ENST00000391109 76 ntBASIC5.21□□□□□ -1.58
APPP05067 AC097374.1-203ENST00000400783 485 ntBASIC5.21□□□□□ -1.58
APPP05067 GSTA9P-201ENST00000406231 611 ntBASIC5.21□□□□□ -1.58
APPP05067 AL590002.1-201ENST00000406554 418 ntBASIC5.21□□□□□ -1.58
APPP05067 USP9YP6-201ENST00000413550 854 ntBASIC5.21□□□□□ -1.58
APPP05067 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.21□□□□□ -1.58
APPP05067 EIF4EP1-201ENST00000422311 642 ntBASIC5.21□□□□□ -1.58
APPP05067 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.21□□□□□ -1.58
APPP05067 AC233728.2-201ENST00000425348 757 ntBASIC5.21□□□□□ -1.58
APPP05067 ISCA1P1-201ENST00000426679 387 ntBASIC5.21□□□□□ -1.58
APPP05067 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.21□□□□□ -1.58
APPP05067 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.21□□□□□ -1.58
APPP05067 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.21□□□□□ -1.58
APPP05067 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.21□□□□□ -1.58
APPP05067 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.21□□□□□ -1.58
APPP05067 PTGES3P3-201ENST00000511479 482 ntBASIC5.21□□□□□ -1.58
APPP05067 RNU6-1220P-201ENST00000517126 108 ntBASIC5.21□□□□□ -1.58
APPP05067 IGKV2D-36-201ENST00000518643 226 ntBASIC5.21□□□□□ -1.58
APPP05067 AL391840.1-201ENST00000571144 367 ntBASIC5.21□□□□□ -1.58
APPP05067 AC034268.2-201ENST00000571784 482 ntBASIC5.21□□□□□ -1.58
APPP05067 MTCO3P24-201ENST00000572729 782 ntBASIC5.21□□□□□ -1.58
APPP05067 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.21□□□□□ -1.58
APPP05067 UBE2L4-201ENST00000587688 464 ntBASIC5.21□□□□□ -1.58
APPP05067 AC068790.5-201ENST00000602741 355 ntBASIC5.21□□□□□ -1.58
APPP05067 AP000907.4-201ENST00000604143 237 ntBASIC5.21□□□□□ -1.58
APPP05067 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APPP05067 ARF4P1-201ENST00000605447 541 ntBASIC5.21□□□□□ -1.58
APPP05067 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APPP05067 AL021997.2-201ENST00000615674 271 ntBASIC5.21□□□□□ -1.58
APPP05067 AL139089.1-201ENST00000620372 975 ntBASIC5.21□□□□□ -1.58
APPP05067 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APPP05067 AL158801.5-201ENST00000623123 465 ntBASIC5.21□□□□□ -1.58
APPP05067 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
APPP05067 PISRT1-201ENST00000626175 531 ntBASIC5.21□□□□□ -1.58
APPP05067 AC055839.1-201ENST00000634467 498 ntBASIC5.21□□□□□ -1.58
APPP05067 MIR3688-2-201ENST00000636963 87 ntBASIC5.21□□□□□ -1.58
APPP05067 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms