Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL137159.1-201ENST00000452808 512 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.98□□□□□ -2.09
SPTA1P02549 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.98□□□□□ -2.09
SPTA1P02549 LRRC37A5P-203ENST00000580181 585 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 AL356280.1-201ENST00000603614 379 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 AC103710.1-201ENST00000610003 901 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.98□□□□□ -2.09
SPTA1P02549 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.98□□□□□ -2.09
SPTA1P02549 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SPTA1P02549 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
SPTA1P02549 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
SPTA1P02549 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SPTA1P02549 Y_RNA.354-201ENST00000365448 111 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SPTA1P02549 U8.10-201ENST00000384260 133 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 MIR221-201ENST00000385135 110 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTA1P02549 HMGN1P33-201ENST00000432945 451 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 RPL23AP74-201ENST00000437246 471 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 AC245517.2-201ENST00000442890 346 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 LINC00888-204ENST00000487386 421 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.97□□□□□ -2.09
SPTA1P02549 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.97□□□□□ -2.09
SPTA1P02549 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTA1P02549 MIR4255-201ENST00000579351 72 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 AC011492.1-201ENST00000600023 315 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.97□□□□□ -2.09
SPTA1P02549 AL078603.1-201ENST00000603824 313 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SPTA1P02549 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SPTA1P02549 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.97□□□□□ -2.09
SPTA1P02549 AC233981.2-201ENST00000611524 1614 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 SNORA67.3-201ENST00000384366 140 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 RNU4-74P-201ENST00000411280 161 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 AL034379.1-201ENST00000423216 253 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTA1P02549 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTA1P02549 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.97□□□□□ -2.09
SPTA1P02549 MIR4644-201ENST00000579929 84 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.97□□□□□ -2.09
SPTA1P02549 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.97□□□□□ -2.09
SPTA1P02549 BX664608.1-201ENST00000610519 487 ntBASIC1.97□□□□□ -2.09
SPTA1P02549 AC007336.1-201ENST00000576365 3828 ntBASIC1.96□□□□□ -2.09
SPTA1P02549 SAGE4P-201ENST00000442271 3381 ntBASIC1.96□□□□□ -2.09
SPTA1P02549 AC090229.1-201ENST00000590983 1609 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SPTA1P02549 AC093536.2-201ENST00000565257 1406 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.96□□□□□ -2.1
SPTA1P02549 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SPTA1P02549 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTA1P02549 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SPTA1P02549 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTA1P02549 RNU1-123P-201ENST00000458950 160 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.96□□□□□ -2.1
SPTA1P02549 AC011604.1-201ENST00000545978 196 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.96□□□□□ -2.1
SPTA1P02549 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.96□□□□□ -2.1
SPTA1P02549 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.96□□□□□ -2.1
SPTA1P02549 AP005137.2-201ENST00000609238 400 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 MTND5P28-201ENST00000438005 1594 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 RN7SKP226-201ENST00000364912 300 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.96□□□□□ -2.1
SPTA1P02549 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.96□□□□□ -2.1
SPTA1P02549 Z73417.1-201ENST00000447373 778 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 AL121594.1-201ENST00000475906 575 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.96□□□□□ -2.1
SPTA1P02549 AC021733.2-201ENST00000518830 497 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 AC068339.2-201ENST00000534395 618 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 AC091515.1-201ENST00000548110 679 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 AC122134.1-201ENST00000565664 1104 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.96□□□□□ -2.1
SPTA1P02549 AC012119.1-201ENST00000603184 222 ntBASIC1.96□□□□□ -2.1
SPTA1P02549 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.95□□□□□ -2.1
SPTA1P02549 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.95□□□□□ -2.1
SPTA1P02549 AC009501.3-201ENST00000605001 1352 ntBASIC1.95□□□□□ -2.1
SPTA1P02549 MTND5P23-201ENST00000430812 1655 ntBASIC1.95□□□□□ -2.1
SPTA1P02549 AL606537.1-201ENST00000607258 2011 ntBASIC1.95□□□□□ -2.1
SPTA1P02549 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.95□□□□□ -2.1
SPTA1P02549 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.95□□□□□ -2.1
SPTA1P02549 RNU1-57P-201ENST00000384491 166 ntBASIC1.95□□□□□ -2.1
SPTA1P02549 AL159169.1-201ENST00000421119 127 ntBASIC1.95□□□□□ -2.1
SPTA1P02549 AC117532.1-201ENST00000514638 323 ntBASIC1.95□□□□□ -2.1
SPTA1P02549 AP005660.1-201ENST00000522972 293 ntBASIC1.95□□□□□ -2.1
SPTA1P02549 AC022709.1-201ENST00000615967 87 ntBASIC1.95□□□□□ -2.1
SPTA1P02549 AC108479.2-201ENST00000617314 601 ntBASIC1.95□□□□□ -2.1
SPTA1P02549 KPNA2P1-201ENST00000458289 1591 ntBASIC1.95□□□□□ -2.1
SPTA1P02549 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SPTA1P02549 AL445437.1-201ENST00000623157 3087 ntBASIC1.94□□□□□ -2.1
SPTA1P02549 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SPTA1P02549 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SPTA1P02549 SNORA25.6-201ENST00000364121 118 ntBASIC1.94□□□□□ -2.1
SPTA1P02549 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SPTA1P02549 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTA1P02549 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTA1P02549 IPMKP1-201ENST00000425988 855 ntBASIC1.94□□□□□ -2.1
SPTA1P02549 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.94□□□□□ -2.1
SPTA1P02549 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTA1P02549 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.94□□□□□ -2.1
SPTA1P02549 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTA1P02549 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms