Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.27□□□□□ -1.73
TOP3BO95985 RNU5F-6P-201ENST00000362979 116 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 RNU6-216P-201ENST00000363282 104 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 SNORD74.4-201ENST00000364129 80 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
TOP3BO95985 RNU6-1122P-201ENST00000384449 107 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 RPL23AP29-201ENST00000397284 453 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 CIR1P3-201ENST00000405137 479 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP3BO95985 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP3BO95985 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.27□□□□□ -1.73
TOP3BO95985 RPL23AP89-201ENST00000439324 255 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 MTATP6P30-201ENST00000443540 664 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP3BO95985 RPL7P31-201ENST00000450192 724 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP3BO95985 SNORD42A-201ENST00000459584 64 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 RPS3AP17-201ENST00000472594 777 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 AC010683.1-201ENST00000473673 378 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 RPL7P24-201ENST00000493052 752 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 RPS27AP13-201ENST00000498403 237 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.27□□□□□ -1.73
TOP3BO95985 AC108078.3-201ENST00000502633 489 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TOP3BO95985 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP3BO95985 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.27□□□□□ -1.73
TOP3BO95985 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.27□□□□□ -1.73
TOP3BO95985 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.27□□□□□ -1.73
TOP3BO95985 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP3BO95985 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.27□□□□□ -1.73
TOP3BO95985 EIF5A2P1-201ENST00000564027 460 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 MIR4716-201ENST00000579628 84 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.27□□□□□ -1.73
TOP3BO95985 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.27□□□□□ -1.73
TOP3BO95985 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP3BO95985 AC063943.3-201ENST00000615562 356 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 AC012314.7-201ENST00000619693 93 ntBASIC4.27□□□□□ -1.73
TOP3BO95985 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.27□□□□□ -1.73
TOP3BO95985 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.27□□□□□ -1.73
TOP3BO95985 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOP3BO95985 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TOP3BO95985 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOP3BO95985 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOP3BO95985 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.27□□□□□ -1.73
TOP3BO95985 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOP3BO95985 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TOP3BO95985 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TOP3BO95985 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP3BO95985 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP3BO95985 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
TOP3BO95985 SNORA72.1-201ENST00000363485 129 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP3BO95985 RNU6-297P-201ENST00000384636 107 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 MIR7-3-201ENST00000384898 110 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 MIR1277-201ENST00000408536 78 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP3BO95985 HMGN1P14-201ENST00000412459 517 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 OFD1P18Y-201ENST00000420889 959 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP3BO95985 YWHAZP8-201ENST00000436935 731 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 MTCO3P18-201ENST00000440206 761 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP3BO95985 AL022238.1-201ENST00000442557 355 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP3BO95985 AC244505.5-201ENST00000443639 207 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.26□□□□□ -1.73
TOP3BO95985 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP3BO95985 Z99127.3-201ENST00000448158 395 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC146507.1-201ENST00000468335 354 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC092989.1-201ENST00000481235 277 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 KLRA1P-201ENST00000503499 986 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 FTH1P21-201ENST00000512179 511 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP3BO95985 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP3BO95985 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP3BO95985 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP3BO95985 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP3BO95985 AC239860.2-201ENST00000525886 270 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP3BO95985 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP3BO95985 AC068446.3-201ENST00000555285 382 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC006960.3-201ENST00000561845 705 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP3BO95985 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP3BO95985 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP3BO95985 AC079587.1-201ENST00000603846 277 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC008945.2-201ENST00000606056 604 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP3BO95985 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 uc_338.13-201ENST00000618243 179 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC138649.3-201ENST00000622154 254 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 DUXAP9-208ENST00000622815 614 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC093648.1-201ENST00000623546 606 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC079228.1-201ENST00000624774 1049 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC140479.6-201ENST00000633535 357 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 MIR3688-2-201ENST00000636963 87 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 AC008013.2-202ENST00000637965 364 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms