Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.2□□□□□ -1.9
POLR1AO95602 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
POLR1AO95602 RNU2-2P-201ENST00000410396 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1AO95602 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.2□□□□□ -1.9
POLR1AO95602 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.2□□□□□ -1.9
POLR1AO95602 AC027673.1-201ENST00000456245 405 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 snoU13.18-201ENST00000459483 104 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
POLR1AO95602 AC107918.3-201ENST00000533272 382 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.15-201ENST00000611544 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.16-201ENST00000613119 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.12-201ENST00000613778 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.20-201ENST00000613956 192 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.9-201ENST00000615427 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.11-201ENST00000616345 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.2-201ENST00000616535 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.3-201ENST00000617785 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.19-201ENST00000618602 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 RNU2-1-201ENST00000618664 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.6-201ENST00000619225 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.5-201ENST00000619465 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 U2.10-201ENST00000620268 191 ntBASIC3.2□□□□□ -1.9
POLR1AO95602 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
POLR1AO95602 AC008432.1-201ENST00000615912 1320 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1AO95602 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR1AO95602 USP9YP7-201ENST00000436723 430 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 RPL7P54-201ENST00000438336 674 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 USP9YP32-201ENST00000452432 430 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 SNORD13-201ENST00000459299 104 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 TRAV11-201ENST00000539512 339 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 OR5H15-201ENST00000383696 930 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 SNORA26.9-201ENST00000391322 122 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 RPL7P53-201ENST00000421245 739 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 IGHV3-76-201ENST00000522465 295 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 AC060766.3-201ENST00000591442 263 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 AP004372.1-201ENST00000604842 844 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 AC067852.7-201ENST00000623270 535 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 AC016542.2-201ENST00000624201 619 ntBASIC3.19□□□□□ -1.9
POLR1AO95602 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
POLR1AO95602 PHKBP1-201ENST00000450951 1951 ntBASIC3.18□□□□□ -1.9
POLR1AO95602 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
POLR1AO95602 AP005901.5-201ENST00000545779 1796 ntBASIC3.18□□□□□ -1.9
POLR1AO95602 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR1AO95602 MIR489-201ENST00000384923 84 ntBASIC3.18□□□□□ -1.9
POLR1AO95602 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.18□□□□□ -1.9
POLR1AO95602 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR1AO95602 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR1AO95602 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR1AO95602 AC010378.1-201ENST00000619270 362 ntBASIC3.18□□□□□ -1.9
POLR1AO95602 AL356266.1-201ENST00000623311 483 ntBASIC3.18□□□□□ -1.9
POLR1AO95602 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
POLR1AO95602 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR1AO95602 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
POLR1AO95602 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
POLR1AO95602 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.17□□□□□ -1.9
POLR1AO95602 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR1AO95602 AC005517.2-201ENST00000424673 553 ntBASIC3.17□□□□□ -1.9
POLR1AO95602 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR1AO95602 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.17□□□□□ -1.9
POLR1AO95602 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR1AO95602 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.17□□□□□ -1.9
POLR1AO95602 AC105137.2-201ENST00000569073 466 ntBASIC3.17□□□□□ -1.9
POLR1AO95602 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
POLR1AO95602 XIAPP3-201ENST00000312918 795 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
POLR1AO95602 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
POLR1AO95602 RNA5SP239-201ENST00000410218 129 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 SETP8-201ENST00000435341 628 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.16□□□□□ -1.9
POLR1AO95602 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.16□□□□□ -1.9
POLR1AO95602 AC005951.1-201ENST00000576706 485 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR1AO95602 VN1R80P-201ENST00000597126 338 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.16□□□□□ -1.9
POLR1AO95602 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
POLR1AO95602 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
POLR1AO95602 RNY1P10-201ENST00000363268 113 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 RNU1-51P-201ENST00000365345 176 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 MIR7-2-201ENST00000384970 110 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 MIR518E-201ENST00000385252 88 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 BTBD10P2-201ENST00000404779 676 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 PTP4A1P7-201ENST00000423476 514 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR1AO95602 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR1AO95602 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
POLR1AO95602 AC091834.1-201ENST00000614543 472 ntBASIC3.16□□□□□ -1.9
POLR1AO95602 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR1AO95602 AL359715.4-201ENST00000606629 1436 ntBASIC3.15□□□□□ -1.9
POLR1AO95602 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
POLR1AO95602 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.15□□□□□ -1.91
POLR1AO95602 SNORA11.4-201ENST00000408823 129 ntBASIC3.15□□□□□ -1.91
POLR1AO95602 AF274854.1-201ENST00000413236 615 ntBASIC3.15□□□□□ -1.91
POLR1AO95602 LUZP4P1-201ENST00000415420 344 ntBASIC3.15□□□□□ -1.91
POLR1AO95602 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR1AO95602 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR1AO95602 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.15□□□□□ -1.91
POLR1AO95602 TRBV26-201ENST00000456572 344 ntBASIC3.15□□□□□ -1.91
POLR1AO95602 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms