Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ZNF90P1-201ENST00000480493 1951 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
UBFD1O14562 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
UBFD1O14562 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
UBFD1O14562 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
UBFD1O14562 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
UBFD1O14562 AL360182.1-201ENST00000397433 468 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 AL445529.1-201ENST00000398713 389 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.5□□□□□ -2.01
UBFD1O14562 BTBD10P2-201ENST00000404779 676 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 RPLP0P7-201ENST00000416050 667 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 TOMM22P1-201ENST00000418578 312 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 OR51AB1P-201ENST00000429046 620 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.5□□□□□ -2.01
UBFD1O14562 MTND2P21-201ENST00000436242 1042 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 HMGB1P48-201ENST00000446155 598 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 RPL21P104-201ENST00000464143 478 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 VN1R17P-201ENST00000472048 1090 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 HMGN2P13-201ENST00000476476 274 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 AC093663.2-201ENST00000484625 313 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
UBFD1O14562 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.5□□□□□ -2.01
UBFD1O14562 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.5□□□□□ -2.01
UBFD1O14562 OR52A4P-203ENST00000498233 1014 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 AC111193.1-201ENST00000504097 155 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.5□□□□□ -2.01
UBFD1O14562 AC016065.2-201ENST00000514530 444 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 RN7SKP132-201ENST00000516001 208 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
UBFD1O14562 COX6B1P6-201ENST00000522347 255 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.5□□□□□ -2.01
UBFD1O14562 HSPE1P20-201ENST00000538133 289 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.5□□□□□ -2.01
UBFD1O14562 MIR4319-201ENST00000577285 85 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.5□□□□□ -2.01
UBFD1O14562 AL390838.2-201ENST00000602394 274 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
UBFD1O14562 MIR6715A-201ENST00000615929 79 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.5□□□□□ -2.01
UBFD1O14562 U6.107-201ENST00000637108 79 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 FAM157B-203ENST00000639350 358 ntBASIC2.5□□□□□ -2.01
UBFD1O14562 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.5□□□□□ -2.01
UBFD1O14562 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UBFD1O14562 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
UBFD1O14562 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.49□□□□□ -2.01
UBFD1O14562 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 MIR9-1-201ENST00000385198 89 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UBFD1O14562 RAP1BP1-201ENST00000412709 553 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.49□□□□□ -2.01
UBFD1O14562 RFESDP1-201ENST00000422350 461 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 OOSP1P1-201ENST00000423265 274 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.49□□□□□ -2.01
UBFD1O14562 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.49□□□□□ -2.01
UBFD1O14562 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.49□□□□□ -2.01
UBFD1O14562 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
UBFD1O14562 RNU6-760P-201ENST00000516078 97 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 SNORA31.21-201ENST00000517180 77 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 AC008562.1-201ENST00000521763 330 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 AC243972.3-201ENST00000539655 198 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 AC128657.1-201ENST00000549459 145 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.49□□□□□ -2.01
UBFD1O14562 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.49□□□□□ -2.01
UBFD1O14562 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.49□□□□□ -2.01
UBFD1O14562 AL109653.1-201ENST00000603091 248 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 NTAN1P1-201ENST00000603150 646 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 AC007619.2-201ENST00000605743 379 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 AC009032.1-201ENST00000617574 431 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.49□□□□□ -2.01
UBFD1O14562 AC010297.1-201ENST00000623948 149 ntBASIC2.49□□□□□ -2.01
UBFD1O14562 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.49□□□□□ -2.01
UBFD1O14562 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.49□□□□□ -2.01
UBFD1O14562 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.49□□□□□ -2.01
UBFD1O14562 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UBFD1O14562 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.49□□□□□ -2.01
UBFD1O14562 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.48□□□□□ -2.01
UBFD1O14562 NSRP1P1-201ENST00000444067 1693 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 VTRNA1-1-201ENST00000363120 99 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 SNORA7.2-201ENST00000364446 145 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 MIR196B-201ENST00000384852 84 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.48□□□□□ -2.01
UBFD1O14562 MTND4LP20-201ENST00000402379 270 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 RNA5SP508-201ENST00000411327 119 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 RNA5SP492-201ENST00000411330 114 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 EI24P1-201ENST00000416584 867 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 MRPL50P2-201ENST00000416821 482 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 AC244453.4-201ENST00000419150 388 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 AC244098.2-201ENST00000422068 99 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.48□□□□□ -2.01
UBFD1O14562 YWHAZP8-201ENST00000436935 731 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 XKRY2-201ENST00000442362 1093 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 Z99714.1-201ENST00000450463 807 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 NPM1P13-201ENST00000452663 865 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.48□□□□□ -2.01
UBFD1O14562 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.48□□□□□ -2.01
UBFD1O14562 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.48□□□□□ -2.01
UBFD1O14562 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.48□□□□□ -2.01
UBFD1O14562 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
UBFD1O14562 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms