Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 ARF4P4-201ENST00000439608 520 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 OSTCP8-201ENST00000445117 448 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 HSFY6P-201ENST00000445573 403 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 PSPHP1-201ENST00000450062 261 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 ANKRD26P4-201ENST00000455755 950 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC109486.1-201ENST00000486833 374 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC006445.2-201ENST00000510061 472 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC108157.1-201ENST00000510511 539 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 PRELID3BP4-201ENST00000515476 571 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU1-40P-201ENST00000516816 164 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU1-97P-201ENST00000516872 164 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 HMGB1P23-201ENST00000518743 568 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 BTF3P12-201ENST00000519620 469 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 OR5AQ1P-201ENST00000527596 927 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR3616-201ENST00000584070 92 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AP001330.4-201ENST00000604350 154 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC100793.4-201ENST00000613683 429 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC016769.4-201ENST00000616893 535 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 U6.48-201ENST00000618523 106 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC244517.1-201ENST00000606030 2086 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AC000403.1-201ENST00000613696 3585 ntBASIC1.34□□□□□ -2.2
CHKB-CPT1BH3BT56 SNORA38-201ENST00000363946 132 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 RNU6-374P-201ENST00000364146 108 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 RNU6-920P-201ENST00000410926 92 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AL030996.1-201ENST00000411430 235 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 RAB28P1-201ENST00000411517 641 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 SYF2P2-201ENST00000417620 583 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AL139413.1-201ENST00000421309 217 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC007064.3-201ENST00000422608 359 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 RPL18P10-201ENST00000425606 538 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC007560.1-201ENST00000426912 237 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 NDUFA5P10-201ENST00000432147 357 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 RPS29P7-201ENST00000439662 171 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 RPL21P23-201ENST00000446654 460 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 WASF1P1-201ENST00000447560 1131 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC004022.1-201ENST00000447766 1066 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC112492.1-201ENST00000449607 712 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 RBMY2UP-201ENST00000453474 324 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 MTCYBP14-201ENST00000457471 715 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC074386.1-201ENST00000476560 767 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 RPL21P13-201ENST00000488305 481 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AP001960.1-201ENST00000506494 658 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 RNU7-193P-201ENST00000516723 65 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC025884.1-201ENST00000556034 378 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR3609-201ENST00000582661 80 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC025594.3-201ENST00000613068 790 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 AC025588.4-201ENST00000615802 908 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 BX649567.1-201ENST00000642071 1134 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 MTCO1P6-201ENST00000481192 1384 ntBASIC1.33□□□□□ -2.2
CHKB-CPT1BH3BT56 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR372-201ENST00000362225 67 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 RNA5SP283-201ENST00000365604 119 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 Y_RNA.493-201ENST00000384422 102 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR493-201ENST00000385254 89 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 U3.19-201ENST00000390893 196 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 U3.29-201ENST00000391296 212 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AL023807.1-201ENST00000407932 359 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 RSL24D1P6-201ENST00000426934 401 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 UBE2V1P1-201ENST00000430836 445 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AL451074.3-201ENST00000437709 472 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AL358232.1-201ENST00000448030 501 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 BUD31P2-201ENST00000449374 300 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 MORF4L1P4-201ENST00000450245 976 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 CACYBPP2-201ENST00000453625 678 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 TRBV26-201ENST00000456572 344 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 RNU6-717P-201ENST00000459076 104 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 RN7SL274P-201ENST00000492268 272 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms