Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC024560.3-201ENST00000608482 349 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 AL136295.6-201ENST00000610486 658 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AL590099.1-201ENST00000615276 138 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC131159.1-201ENST00000621854 213 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC244205.2-202ENST00000635781 342 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SRRM4A7MD48 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SRRM4A7MD48 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 RPL32P3-201ENST00000359025 275 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 RNU1-18P-201ENST00000363062 164 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 RNU6-744P-201ENST00000365557 107 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 RNU6-1316P-201ENST00000384242 108 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 RNU6-882P-201ENST00000391025 103 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL022722.2-201ENST00000402519 180 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL136372.1-201ENST00000403060 228 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 RNA5SP317-201ENST00000410176 116 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 RNU2-43P-201ENST00000410306 190 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 RNA5SP311-201ENST00000411290 116 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 TPMTP3-201ENST00000411928 735 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 RAP1BP1-201ENST00000412709 553 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 MTND1P21-201ENST00000412991 285 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL117351.1-201ENST00000438864 766 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL591503.2-201ENST00000442314 1005 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC112653.1-201ENST00000443851 386 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 OR9M1P-201ENST00000459641 921 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 PPIAP15-201ENST00000479662 484 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC021678.1-201ENST00000505195 936 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC004069.2-201ENST00000505438 1114 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 RNA5SP315-201ENST00000516340 116 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 RNA5SP312-201ENST00000517068 116 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC087276.1-201ENST00000529659 480 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC007954.1-201ENST00000554198 494 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL353778.1-201ENST00000603149 408 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC012443.1-201ENST00000605605 231 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 BRDTP1-201ENST00000605735 677 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC064807.4-201ENST00000607201 407 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC092354.2-201ENST00000607786 514 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC106028.5-201ENST00000610332 395 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AL031667.3-201ENST00000620124 655 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC078883.4-201ENST00000623218 367 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 AC017037.3-201ENST00000625016 472 ntBASIC3.11□□□□□ -1.91
SRRM4A7MD48 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SRRM4A7MD48 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SRRM4A7MD48 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SRRM4A7MD48 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.11□□□□□ -1.91
SRRM4A7MD48 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 OTUD4P1-201ENST00000237841 3067 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AL672167.1-206ENST00000356293 943 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 RNU6-289P-201ENST00000364093 107 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 Y_RNA.302-201ENST00000364997 102 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 DEFB109C-201ENST00000382575 264 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 DEFB109B-201ENST00000382656 264 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 RNU6-1207P-201ENST00000384343 107 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 SNORA70C-201ENST00000384538 135 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 RPS26P8-201ENST00000393490 348 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 HLFP1-201ENST00000402375 499 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 RPL21P65-201ENST00000406094 466 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 MIR1290-201ENST00000408735 78 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms