Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC108479.2-201ENST00000617314 601 ntBASIC2.82□□□□□ -1.96
RGPD3A6NKT7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RGPD3A6NKT7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RGPD3A6NKT7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
RGPD3A6NKT7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RGPD3A6NKT7 AC097714.1-201ENST00000511272 1647 ntBASIC2.82□□□□□ -1.96
RGPD3A6NKT7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.82□□□□□ -1.96
RGPD3A6NKT7 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.82□□□□□ -1.96
RGPD3A6NKT7 SNORA11.4-201ENST00000408823 129 ntBASIC2.82□□□□□ -1.96
RGPD3A6NKT7 AL606490.7-201ENST00000433136 191 ntBASIC2.82□□□□□ -1.96
RGPD3A6NKT7 NDUFB4P6-201ENST00000436819 366 ntBASIC2.82□□□□□ -1.96
RGPD3A6NKT7 AC103975.1-201ENST00000482506 483 ntBASIC2.82□□□□□ -1.96
RGPD3A6NKT7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.82□□□□□ -1.96
RGPD3A6NKT7 MFSD8-245ENST00000641743 948 ntBASIC2.82□□□□□ -1.96
RGPD3A6NKT7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RGPD3A6NKT7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
RGPD3A6NKT7 PHKBP1-201ENST00000450951 1951 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
RGPD3A6NKT7 RPS24P8-201ENST00000431490 402 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.81□□□□□ -1.96
RGPD3A6NKT7 ELOCP13-201ENST00000443934 329 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.81□□□□□ -1.96
RGPD3A6NKT7 AL035551.1-201ENST00000446931 348 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.81□□□□□ -1.96
RGPD3A6NKT7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.81□□□□□ -1.96
RGPD3A6NKT7 RNA5SP309-201ENST00000516670 106 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 RN7SKP96-201ENST00000516948 297 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 AL359198.2-201ENST00000611836 194 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 XKRY2-202ENST00000623874 1581 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 AC092326.2-201ENST00000624772 1561 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 XKRY-202ENST00000624960 1581 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RGPD3A6NKT7 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.81□□□□□ -1.96
RGPD3A6NKT7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
RGPD3A6NKT7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.8□□□□□ -1.96
RGPD3A6NKT7 MIR7-2-201ENST00000384970 110 ntBASIC2.8□□□□□ -1.96
RGPD3A6NKT7 MIR221-201ENST00000385135 110 ntBASIC2.8□□□□□ -1.96
RGPD3A6NKT7 HMGB1P11-201ENST00000413899 637 ntBASIC2.8□□□□□ -1.96
RGPD3A6NKT7 EI24P1-201ENST00000416584 867 ntBASIC2.8□□□□□ -1.96
RGPD3A6NKT7 AC098826.1-201ENST00000433943 471 ntBASIC2.8□□□□□ -1.96
RGPD3A6NKT7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.8□□□□□ -1.96
RGPD3A6NKT7 NDUFA5P4-201ENST00000436704 385 ntBASIC2.8□□□□□ -1.96
RGPD3A6NKT7 RPL23AP44-201ENST00000482216 473 ntBASIC2.8□□□□□ -1.96
RGPD3A6NKT7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.8□□□□□ -1.96
RGPD3A6NKT7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.8□□□□□ -1.96
RGPD3A6NKT7 AL359821.1-201ENST00000605519 182 ntBASIC2.8□□□□□ -1.96
RGPD3A6NKT7 AC245517.5-201ENST00000611529 162 ntBASIC2.8□□□□□ -1.96
RGPD3A6NKT7 AC116447.1-201ENST00000613153 453 ntBASIC2.8□□□□□ -1.96
RGPD3A6NKT7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RGPD3A6NKT7 FRG1BP-201ENST00000278882 761 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 MIR378A-201ENST00000362177 66 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 DYNLT3P1-201ENST00000378574 347 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 CYCSP49-201ENST00000420810 319 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.79□□□□□ -1.96
RGPD3A6NKT7 AC099336.2-201ENST00000422457 254 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 AC004866.2-201ENST00000438285 481 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 RPS26P30-201ENST00000443431 335 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 RPS27P27-201ENST00000498779 255 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 RN7SKP82-201ENST00000516786 223 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.79□□□□□ -1.96
RGPD3A6NKT7 AC126177.3-201ENST00000551839 688 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.79□□□□□ -1.96
RGPD3A6NKT7 VN1R80P-201ENST00000597126 338 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.79□□□□□ -1.96
RGPD3A6NKT7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 U6.98-201ENST00000637157 84 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RGPD3A6NKT7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RGPD3A6NKT7 MUPP-201ENST00000438111 566 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 CACYBPP1-201ENST00000438592 684 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 HSPE1P22-201ENST00000456856 327 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.79□□□□□ -1.96
RGPD3A6NKT7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.79□□□□□ -1.96
RGPD3A6NKT7 MIR4506-201ENST00000584693 77 ntBASIC2.79□□□□□ -1.96
RGPD3A6NKT7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.79□□□□□ -1.96
RGPD3A6NKT7 AC004520.1-201ENST00000608362 1413 ntBASIC2.78□□□□□ -1.96
RGPD3A6NKT7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RGPD3A6NKT7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.78□□□□□ -1.96
RGPD3A6NKT7 HSPE1P26-201ENST00000405341 275 ntBASIC2.78□□□□□ -1.96
RGPD3A6NKT7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
RGPD3A6NKT7 ARF4P2-201ENST00000430209 526 ntBASIC2.78□□□□□ -1.96
RGPD3A6NKT7 RPS15AP28-201ENST00000435088 386 ntBASIC2.78□□□□□ -1.96
RGPD3A6NKT7 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.78□□□□□ -1.96
RGPD3A6NKT7 AC011753.1-201ENST00000451001 220 ntBASIC2.78□□□□□ -1.96
RGPD3A6NKT7 AC004263.1-201ENST00000479327 332 ntBASIC2.78□□□□□ -1.96
RGPD3A6NKT7 RNA5SP385-201ENST00000515947 110 ntBASIC2.78□□□□□ -1.96
RGPD3A6NKT7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.78□□□□□ -1.96
RGPD3A6NKT7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.78□□□□□ -1.96
RGPD3A6NKT7 AC091488.1-201ENST00000604239 660 ntBASIC2.78□□□□□ -1.96
RGPD3A6NKT7 Y_RNA.355-201ENST00000365462 98 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 COX6CP2-201ENST00000444980 225 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AC008083.2-201ENST00000546707 476 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AC006116.7-201ENST00000590141 756 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AL391813.2-201ENST00000609113 322 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms