Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC005345.1-201ENST00000431868 217 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 B3GNT2P1-201ENST00000434960 952 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 MTCO1P53-201ENST00000441633 699 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AL590399.6-201ENST00000446396 307 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC104073.1-201ENST00000451988 151 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 NDUFA5P7-201ENST00000452914 242 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 MTATP6P9-201ENST00000515039 680 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 IGKV2D-36-201ENST00000518643 226 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 OR5D17P-201ENST00000531492 978 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 OR8K4P-201ENST00000534608 872 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 ZNF192P1-203ENST00000565888 810 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC074051.3-201ENST00000570238 358 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 MIR5708-201ENST00000579723 85 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC009237.15-201ENST00000610252 501 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AP003485.1-201ENST00000625093 753 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC068620.4-201ENST00000636730 1182 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC087821.2-201ENST00000637086 450 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AL445984.1-201ENST00000637834 659 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AL672296.1-201ENST00000427780 2158 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 HMGB1P5-201ENST00000255320 642 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 RNU6-374P-201ENST00000364146 108 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 RNU6-7-201ENST00000364784 107 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 RNU6-8-201ENST00000365467 107 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 RNU6-657P-201ENST00000383904 107 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 Y_RNA.472-201ENST00000384322 102 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 MIR649-201ENST00000384843 97 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AL355379.1-201ENST00000405542 640 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AL133264.1-201ENST00000407157 562 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 RPL31P2-201ENST00000413849 377 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 BOLA3P4-201ENST00000418151 400 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 SETP5-201ENST00000437270 562 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AL135938.1-201ENST00000443141 297 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AC079776.3-201ENST00000450665 370 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 USP9YP5-201ENST00000511770 630 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 OR4G1P-201ENST00000588632 938 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AC015871.2-201ENST00000603605 948 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AC011458.1-201ENST00000604034 617 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AP003973.1-201ENST00000604639 691 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AC123767.1-202ENST00000620407 817 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AC048347.1-201ENST00000624621 427 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 AC099654.9-201ENST00000637055 678 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 MFSD8-245ENST00000641743 948 ntBASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMIM28A0A1B0GU29 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 PABPC1P7-201ENST00000413177 1513 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 RNU6-925P-201ENST00000384629 104 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 SNORD65.1-201ENST00000390889 71 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 SSXP10-201ENST00000402595 565 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 HSPE1P26-201ENST00000405341 275 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 SNRPGP3-201ENST00000469405 227 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AC104057.1-201ENST00000515547 497 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 SNORA48.10-201ENST00000516965 160 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AC021451.1-201ENST00000523498 1129 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AC092470.1-201ENST00000546187 132 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AC091515.1-201ENST00000548110 679 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AC090616.5-202ENST00000582111 297 ntBASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SMIM28A0A1B0GU29 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms