Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RNU6-280P-201ENST00000364145 104 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 RNY3P11-201ENST00000364153 102 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 Y_RNA.471-201ENST00000384312 102 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 RPS3P2-201ENST00000421346 701 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AL160275.3-201ENST00000423876 471 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 Y_RNA.687-201ENST00000516558 91 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 ERHP1-201ENST00000523006 310 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AP006587.4-201ENST00000526053 529 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AL355877.2-201ENST00000603670 358 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AL160281.1-201ENST00000605307 311 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AC092747.4-201ENST00000620519 1861 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AP000756.2-201ENST00000624168 2567 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 AC093849.1-201ENST00000563631 2209 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC004158.1-201ENST00000564508 4319 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC092692.1-201ENST00000623625 2595 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 RNA5SP375-201ENST00000362975 119 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 Y_RNA.150-201ENST00000363562 102 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 RNU6-338P-201ENST00000383888 105 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 MT-TC-201ENST00000387405 66 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC116036.1-201ENST00000412199 367 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC099677.1-201ENST00000420575 175 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 REREP1Y-201ENST00000422655 198 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC096920.1-201ENST00000423991 241 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 C4BPAP2-201ENST00000428434 478 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC073063.1-201ENST00000434352 607 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 REREP2Y-201ENST00000439103 200 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC002553.3-201ENST00000453002 341 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC112187.1-201ENST00000455837 479 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 CBX3P8-201ENST00000532412 525 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 OR1M4P-201ENST00000589199 287 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC008521.2-201ENST00000591021 259 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AL161616.1-201ENST00000611867 286 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 IRF5P1-201ENST00000504852 2164 ntBASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HRH3Q9Y5N1 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC020633.1-201ENST00000468439 2247 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 Y_RNA.48-201ENST00000362710 103 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 Y_RNA.462-201ENST00000384268 102 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 CYB5AP4-201ENST00000396692 399 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms