Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HHLA3Q9XRX5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.11□□□□□ -2.07
HHLA3Q9XRX5 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 RNU6-50P-201ENST00000362356 103 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 RNU1-35P-201ENST00000362782 153 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 RNU6-441P-201ENST00000384545 106 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AL139095.1-201ENST00000404326 391 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 SNORA11-201ENST00000408789 128 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 SSXP9-201ENST00000417503 292 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 HSFY1P1-201ENST00000423928 1178 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 UBE2D3P2-201ENST00000424409 445 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC006548.1-201ENST00000427470 102 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC073508.1-201ENST00000428866 656 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AL512649.1-201ENST00000428997 581 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 RPS20P5-201ENST00000434808 360 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC112492.1-201ENST00000449607 712 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 MTND3P4-201ENST00000453537 303 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC034236.1-201ENST00000469891 373 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC090525.1-201ENST00000479116 478 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 RPS29P2-201ENST00000479278 136 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 OR5H5P-201ENST00000503164 928 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 MIR5195-201ENST00000583555 115 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC092474.3-201ENST00000603022 568 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC096947.1-201ENST00000603233 470 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC025588.3-201ENST00000604182 274 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AC124312.4-201ENST00000605533 310 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 CYCSP41-201ENST00000616920 296 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 AP003122.6-201ENST00000623831 495 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 CR381572.1-201ENST00000625098 102 ntBASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
HHLA3Q9XRX5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 RNU6-444P-201ENST00000383988 108 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 RNU6-851P-201ENST00000384565 107 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 MIR181A2-201ENST00000384863 110 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 RNU6-796P-201ENST00000391086 107 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 FNDC3CP-201ENST00000420795 1155 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 TRIM60P13-201ENST00000432350 1283 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 RPL23AP58-201ENST00000440453 469 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AL034418.1-201ENST00000448675 860 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 snoU13.4-201ENST00000458916 104 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AP001992.1-205ENST00000462248 379 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC104472.2-201ENST00000469035 601 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 TBCAP3-201ENST00000512475 312 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 RNU6-751P-201ENST00000516382 101 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 HIGD1AP6-201ENST00000521833 279 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC233266.2-201ENST00000567067 528 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC012493.2-201ENST00000595083 291 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC006539.2-201ENST00000601729 572 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC091057.2-201ENST00000602594 792 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AL356575.1-201ENST00000603008 283 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC013468.1-201ENST00000608680 598 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AP001033.2-201ENST00000609701 1003 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AL162274.2-201ENST00000614406 332 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC090116.1-201ENST00000615679 446 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 MIR1264-201ENST00000616374 69 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AC073569.3-201ENST00000619055 682 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 AL162233.1-201ENST00000620014 944 ntBASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HHLA3Q9XRX5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.09□□□□□ -2.08
HHLA3Q9XRX5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
HHLA3Q9XRX5 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
HHLA3Q9XRX5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HHLA3Q9XRX5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
HHLA3Q9XRX5 MTND5P11-201ENST00000511037 1812 ntBASIC2.08□□□□□ -2.08
HHLA3Q9XRX5 AL035425.3-201ENST00000564206 4996 ntBASIC2.08□□□□□ -2.08
HHLA3Q9XRX5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HHLA3Q9XRX5 RNA5SP374-201ENST00000362939 125 ntBASIC2.08□□□□□ -2.08
HHLA3Q9XRX5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms