Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AC090971.4-201ENST00000560291 1800 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 SELENOWP1-201ENST00000322792 252 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 GNG5P2-201ENST00000372054 207 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 Y_RNA.556-201ENST00000384677 113 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 Y_RNA.574-201ENST00000384766 95 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 RNU6-837P-201ENST00000391056 108 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AL590704.1-201ENST00000402856 794 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AL160275.3-201ENST00000423876 471 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 RSL24D1P6-201ENST00000426934 401 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AC126120.1-201ENST00000431082 470 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 NOTCH2P1-201ENST00000443481 624 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 RPL36AP39-201ENST00000445859 318 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 CYCSP34-201ENST00000458172 304 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AC245028.2-201ENST00000458673 253 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 snoU13.29-201ENST00000459370 104 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AC026979.1-201ENST00000492525 396 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 CEACAMP10-202ENST00000495431 496 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 TOMM22P4-201ENST00000511318 336 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 SNORA31.3-201ENST00000516029 96 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 RNU6-475P-201ENST00000516073 104 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 RN7SKP288-201ENST00000516227 268 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 MIR3176-201ENST00000582210 90 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AC011494.1-201ENST00000596454 237 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AC011373.1-201ENST00000607270 237 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AC022467.1-201ENST00000614738 749 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AC005592.1-201ENST00000566527 1640 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AL158163.1-201ENST00000603915 1649 ntBASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 SOCS5P3-201ENST00000425115 1576 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC010266.2-201ENST00000564741 3255 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RNU6-45P-201ENST00000384471 107 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RNU6-14P-201ENST00000384630 106 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 U3.25-201ENST00000391209 220 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RPS4XP7-201ENST00000406274 780 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RNU6-712P-201ENST00000410558 100 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RNU4-78P-201ENST00000410940 126 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC092809.3-201ENST00000415453 231 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RPS4XP5-201ENST00000419038 768 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RPS12P17-201ENST00000438591 377 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 HMGB1P12-201ENST00000438594 598 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 PTMAP6-201ENST00000439110 327 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RNU7-138P-201ENST00000459479 64 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RN7SL177P-201ENST00000476596 299 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC084198.1-201ENST00000477747 402 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC092451.1-201ENST00000480211 153 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RPL38P3-201ENST00000484463 213 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC007686.1-201ENST00000488511 463 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 RPS27AP13-201ENST00000498403 237 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 HMGN2P36-201ENST00000529541 409 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC091516.1-201ENST00000549191 703 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC113195.1-201ENST00000579952 141 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 MIR4260-201ENST00000583107 67 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AL139099.4-201ENST00000614802 114 ntBASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXD3Q9UJU5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms