Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL596327.1-201ENST00000603629 213 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC008121.2-201ENST00000614647 523 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 MIR7844-201ENST00000616161 122 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AL732618.1-201ENST00000623251 301 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AC090582.1-201ENST00000636321 199 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 NCAPGP1-201ENST00000505112 1814 ntBASIC3.9□□□□□ -1.79
SIX4Q9UIU6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SIX4Q9UIU6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC007656.2-201ENST00000624902 4547 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC007685.1-201ENST00000329806 452 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 RNU1-18P-201ENST00000363062 164 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 RNA5SP88-201ENST00000365560 109 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 Y_RNA.553-201ENST00000384670 102 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 SNORA48.7-201ENST00000391302 135 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 SNRPEP2-201ENST00000397592 279 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 RN7SKP142-201ENST00000411236 328 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 DBIP2-201ENST00000419076 262 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC006366.1-201ENST00000422002 759 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AL953862.1-201ENST00000423016 168 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 BMS1P19-201ENST00000433925 393 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC092427.1-201ENST00000439177 601 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 TRIM60P18-201ENST00000441518 828 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 MTCO1P19-201ENST00000443487 500 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 EEF1E1P1-201ENST00000446998 430 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 MTCO1P48-201ENST00000448024 1096 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 RPL36AP33-201ENST00000450395 310 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 USP9YP10-201ENST00000454868 628 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 RN7SL93P-201ENST00000463035 293 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC091564.1-201ENST00000464563 479 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC092757.1-201ENST00000467293 467 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC106707.2-201ENST00000484182 374 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 RPL21P129-201ENST00000491732 478 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 KLRA1P-201ENST00000503499 986 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 USP9YP5-201ENST00000511770 630 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 MTND3P5-201ENST00000512798 333 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AL161713.1-201ENST00000555538 145 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC012414.6-201ENST00000568241 401 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 MIR3922-201ENST00000585192 84 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AL139286.1-201ENST00000604465 483 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC018816.2-201ENST00000621460 353 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 AC095050.2-201ENST00000510748 1458 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 ZNF37BP-203ENST00000452306 1352 ntBASIC3.89□□□□□ -1.79
SIX4Q9UIU6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX4Q9UIU6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC117529.2-201ENST00000512159 2068 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 RNU1-85P-201ENST00000364127 164 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 RNU6-441P-201ENST00000384545 106 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 RNU1-89P-201ENST00000384592 164 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 VN1R10P-201ENST00000447106 875 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 EPS15P1-201ENST00000448836 336 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC010655.1-201ENST00000449336 292 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 DNAJC19P1-201ENST00000455312 319 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 RPL7P15-201ENST00000461190 712 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC006499.5-201ENST00000505037 514 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 RN7SKP13-201ENST00000515933 244 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 RN7SKP18-201ENST00000516005 275 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC239860.2-201ENST00000525886 270 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms