Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNA5SP307-201ENST00000362863 116 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 RHOT1P2-201ENST00000366423 333 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 RNU6-533P-201ENST00000384144 107 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 RNU6-769P-201ENST00000384407 104 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 TPMTP2-201ENST00000414372 726 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 NANOGP6-201ENST00000429190 847 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AL132765.1-201ENST00000434165 553 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC073614.1-201ENST00000438690 650 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 VN1R34P-201ENST00000447387 883 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 ANP32BP2-201ENST00000454525 545 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 OR6K1P-201ENST00000456766 971 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC017015.1-201ENST00000477387 286 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC112204.1-201ENST00000502591 103 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 MIR3913-1-201ENST00000577744 102 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 VN1R85P-201ENST00000601587 426 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AL049634.3-201ENST00000604968 457 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AP003117.2-201ENST00000606010 545 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AL592295.2-201ENST00000612578 206 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC008250.2-201ENST00000615261 205 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AL672167.1-205ENST00000641112 3080 ntBASIC4.44□□□□□ -1.7
DKK3Q9UBP4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 RNU6-777P-201ENST00000364265 104 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 MIR195-201ENST00000385194 87 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 SNORD96B-201ENST00000386148 79 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 DSTNP4-201ENST00000399472 474 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AL445189.1-201ENST00000405722 338 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 SNRPFP1-201ENST00000414761 252 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC245052.5-201ENST00000416320 649 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 DPPA2P1-201ENST00000428060 556 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 TIMM9P3-201ENST00000428659 274 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 USP9YP7-201ENST00000436723 430 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 YWHAZP8-201ENST00000436935 731 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 MTND5P14-201ENST00000441481 1267 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 MTATP6P30-201ENST00000443540 664 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 USP9YP32-201ENST00000452432 430 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC027673.1-201ENST00000456245 405 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AL121769.1-201ENST00000469473 401 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC087385.1-201ENST00000475062 312 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 ACTR3P3-201ENST00000480448 893 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 FAM172BP-201ENST00000487497 1089 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 RPS4XP18-201ENST00000495480 763 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 TMEM251P1-201ENST00000503717 318 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 Vault.1-201ENST00000516474 102 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 RNA5SP309-201ENST00000516670 106 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 SNORA18.6-201ENST00000516792 115 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 ZNF705CP-201ENST00000530515 889 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC007224.1-201ENST00000564410 144 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 MTND6P33-201ENST00000571794 183 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC137800.2-201ENST00000574375 120 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC004067.1-201ENST00000608733 700 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC011944.2-201ENST00000624440 683 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 U6.101-201ENST00000637707 76 ntBASIC4.43□□□□□ -1.7
DKK3Q9UBP4 AC099654.13-201ENST00000639774 207 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms