Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MIR3149-201ENST00000584629 83 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 VN1R107P-201ENST00000601784 209 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 AC113194.1-201ENST00000606037 500 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 AC025034.2-201ENST00000623264 286 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTN3Q9P232 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTN3Q9P232 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 MTND5P19-201ENST00000424872 1794 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 RPL32P3-201ENST00000359025 275 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 RNA5SP305-201ENST00000362665 119 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 RNA5SP90-201ENST00000364801 99 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 SNORD115-7-201ENST00000365306 82 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 RNU4-46P-201ENST00000410818 138 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 RNU6-954P-201ENST00000411355 107 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 RPL7L1P1-201ENST00000448259 785 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 BTF3P15-201ENST00000455606 336 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 RPL30P15-201ENST00000457129 321 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 RPL36AP13-201ENST00000457490 317 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 SNORD97-201ENST00000459187 142 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC004801.2-202ENST00000463559 283 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 RPL7AP6-201ENST00000477943 801 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC004453.1-201ENST00000487895 408 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC079140.5-201ENST00000507882 310 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC017037.1-201ENST00000508460 471 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 RNU6-794P-201ENST00000517261 64 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AP003122.3-201ENST00000526316 255 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 OR5D15P-201ENST00000531671 942 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 MIR4660-201ENST00000583549 74 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC007938.3-201ENST00000604965 623 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC090510.2-201ENST00000617465 629 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 AL161637.1-201ENST00000622380 412 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTN3Q9P232 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.66□□□□□ -1.5
CNTN3Q9P232 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTN3Q9P232 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTN3Q9P232 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.65□□□□□ -1.5
CNTN3Q9P232 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTN3Q9P232 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.65□□□□□ -1.5
CNTN3Q9P232 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.65□□□□□ -1.5
CNTN3Q9P232 AP005435.3-201ENST00000531260 3198 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 RNU6-1287P-201ENST00000362914 107 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 SNORA74A-201ENST00000364089 198 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 RN7SKP153-201ENST00000365026 316 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 RNU5E-6P-201ENST00000365574 115 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 RNA5SP187-201ENST00000384400 119 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 RNU6-1060P-201ENST00000384664 107 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 MIR600-201ENST00000385007 98 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 AL121834.1-202ENST00000404494 277 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 SNORA11B-201ENST00000408175 129 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 POLHP1-201ENST00000411806 470 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 VDAC1P9-201ENST00000412766 841 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 RPL31P2-201ENST00000413849 377 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.65□□□□□ -1.5
CNTN3Q9P232 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 RPL30P3-201ENST00000424262 333 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CNTN3Q9P232 MTCYBP9-201ENST00000431021 303 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.65□□□□□ -1.5
CNTN3Q9P232 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CNTN3Q9P232 RPL35AP22-201ENST00000436855 335 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.65□□□□□ -1.5
CNTN3Q9P232 AL589765.3-201ENST00000446084 462 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 AC073850.1-201ENST00000449243 255 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 AC092647.2-201ENST00000452998 253 ntBASIC5.65□□□□□ -1.5
CNTN3Q9P232 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms