Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AL606490.9-201ENST00000603331 271 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AL596327.1-201ENST00000603629 213 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AL049634.3-201ENST00000604968 457 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AL592436.1-201ENST00000605135 558 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC107214.2-201ENST00000608204 634 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 RNA5SP196-201ENST00000625967 102 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC084035.1-201ENST00000634543 607 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 MFSD8-236ENST00000641509 4050 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 CR383658.2-201ENST00000547576 1525 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 MAPK10-372ENST00000641954 3413 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 FAM91A3P-201ENST00000456826 2544 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 XPOTP1-201ENST00000443317 2398 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 Y_RNA.505-201ENST00000384489 102 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 FABP12P1-201ENST00000401911 322 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AL136116.1-201ENST00000403591 381 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 MTCO2P34-201ENST00000421994 607 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AL953862.1-201ENST00000423016 168 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 RNU6-956P-201ENST00000458868 103 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC010301.1-201ENST00000473936 355 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC006499.5-201ENST00000505037 514 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 Vault.1-201ENST00000516474 102 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC022880.1-201ENST00000534017 973 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 MIR3611-201ENST00000584484 83 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC068790.6-201ENST00000602558 258 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AL034351.1-201ENST00000605288 668 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AL139286.2-201ENST00000606838 396 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC243773.3-201ENST00000613270 256 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC018816.2-201ENST00000621460 353 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 AC006927.3-201ENST00000638789 384 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 PABPC1P9-201ENST00000426076 1612 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 MTND4P16-201ENST00000466108 1367 ntBASIC3.88□□□□□ -1.79
SMARCAL1Q9NZC9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC117529.2-201ENST00000512159 2068 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 RNA5SP42-201ENST00000364278 115 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 RNA5SP97-201ENST00000365006 84 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 SNORA57.3-201ENST00000411095 141 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC073264.1-201ENST00000411508 416 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 MTCO3P41-201ENST00000414801 328 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 MTCO1P21-201ENST00000416634 589 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 OR8F1P-201ENST00000425243 930 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 USP9YP28-201ENST00000435142 589 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AL512286.1-201ENST00000439244 400 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 RPL21P89-201ENST00000444021 467 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 COX6CP2-201ENST00000444980 225 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 VN1R10P-201ENST00000447106 875 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 ELOCP30-201ENST00000447108 299 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 USP9YP10-201ENST00000454868 628 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 SNRPGP9-201ENST00000456025 225 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC084357.1-201ENST00000473404 255 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 KLRA1P-201ENST00000503499 986 ntBASIC3.87□□□□□ -1.79
SMARCAL1Q9NZC9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms