Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 GNL2P1-201ENST00000451274 2190 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 Y_RNA.26-201ENST00000362539 101 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 SNORA24.1-201ENST00000384401 135 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 MIR130B-202ENST00000385018 82 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-550P-201ENST00000391057 101 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC015977.1-201ENST00000418887 292 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 C4BPAP2-201ENST00000428434 478 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 MRPS18BP2-201ENST00000434310 759 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 RPS3AP12-201ENST00000443616 753 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 FTLP8-201ENST00000446770 267 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC022034.3-201ENST00000471393 478 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 RN7SL273P-201ENST00000481561 299 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 ATP5LP5-201ENST00000483050 299 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC005798.1-201ENST00000513715 387 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 SNORD46.2-201ENST00000516021 102 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC079905.1-201ENST00000549280 475 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AL049839.1-201ENST00000556151 657 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC025857.2-201ENST00000602711 238 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AL512624.1-201ENST00000613638 469 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AL161423.1-201ENST00000613700 262 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC138965.3-201ENST00000623875 498 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 AC005725.1-201ENST00000577346 2607 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 BTBD10P1-201ENST00000549824 1352 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC074029.4-201ENST00000624796 1859 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC108751.5-201ENST00000492880 1336 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 RN7SKP115-201ENST00000363177 317 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 RNU4-50P-201ENST00000364361 141 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 RNU105B-201ENST00000364478 208 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-806P-201ENST00000365147 105 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 Y_RNA.577-201ENST00000384794 101 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 MIR143-201ENST00000385300 106 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 RNU11-201ENST00000387069 134 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 RPL21P24-201ENST00000413752 448 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AL161636.2-201ENST00000445179 927 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC016696.1-201ENST00000446949 318 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 NOP56P2-201ENST00000447491 769 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC097486.1-201ENST00000515331 210 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-1332P-201ENST00000516666 104 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-570P-201ENST00000517051 105 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 CYCSP22-201ENST00000517555 339 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AP003733.2-201ENST00000529409 171 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC007494.1-201ENST00000562293 760 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 MIR132-201ENST00000591554 101 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AL360012.1-201ENST00000602813 131 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC073488.3-201ENST00000631611 778 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms