Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC104389.3-201ENST00000445629 235 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 HMGN2P21-201ENST00000447764 270 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 XKRYP5-201ENST00000449659 483 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 RNU4-18P-201ENST00000516751 149 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC090695.1-201ENST00000561269 1222 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC006116.7-201ENST00000590141 756 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AP004372.1-201ENST00000604842 844 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC016877.3-201ENST00000606778 504 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC087241.4-201ENST00000612441 480 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 U4.3-201ENST00000621047 82 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AL355578.1-201ENST00000607405 1328 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 U8.2-201ENST00000363156 134 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 RNU6-618P-201ENST00000363518 112 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 MIR607-201ENST00000385241 96 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 MIR887-201ENST00000401258 79 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AL590290.1-201ENST00000405336 380 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 RPL7P46-201ENST00000425129 740 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 MIR6766-201ENST00000622641 72 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AC092881.1-201ENST00000638218 2733 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 ELOCP11-201ENST00000436690 332 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 HMGB1P12-201ENST00000438594 598 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 ELOCP16-201ENST00000444494 332 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 ARL5AP2-201ENST00000444698 533 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AC069304.3-201ENST00000603938 1084 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AP005212.4-201ENST00000614206 710 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 AP001350.1-201ENST00000601906 1524 ntBASIC2.18□□□□□ -2.06
KIAA1549Q9HCM3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 DEFA7P-201ENST00000382676 285 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 AP000567.1-201ENST00000406413 156 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 RPL26P37-201ENST00000411983 438 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 AL158825.1-201ENST00000414735 521 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 ATG3P1-201ENST00000419507 911 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 OR7L1P-201ENST00000456181 380 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 GAPDHP39-201ENST00000481866 979 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 AC008716.1-201ENST00000511084 513 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 RN7SKP96-201ENST00000516948 297 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 AC010198.2-201ENST00000550612 259 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 MIR3690-201ENST00000580266 75 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 FAM60CP-201ENST00000591086 664 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 AC007938.3-201ENST00000604965 623 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 AL359198.2-201ENST00000611836 194 ntBASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.17□□□□□ -2.06
KIAA1549Q9HCM3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 MIR6073-201ENST00000352083 89 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC109583.1-201ENST00000432156 268 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AL157827.1-201ENST00000447622 132 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 HMGN1P5-201ENST00000448591 263 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 RPL30P11-201ENST00000495304 339 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 YWHAEP4-201ENST00000505390 198 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC008549.1-201ENST00000512900 643 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 RN7SKP24-201ENST00000515888 284 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 RN7SKP277-201ENST00000516895 283 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms