Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC090502.2-201ENST00000549267 280 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 MED28P6-201ENST00000558776 231 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AL512506.1-201ENST00000613918 449 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC078880.5-201ENST00000617845 421 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC026634.1-201ENST00000634369 198 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 CUL1P1-201ENST00000509510 2425 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 U3.6-201ENST00000363622 211 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 RNU6-173P-201ENST00000364215 104 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 RPL22P22-201ENST00000395439 379 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 RNU2-15P-201ENST00000410692 191 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 RNA5SP38-201ENST00000410750 119 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 MTCO3P1-205ENST00000422088 832 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 USP9YP36-201ENST00000424581 829 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 MTCYBP32-201ENST00000427945 1084 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 MTCYBP15-201ENST00000433123 1127 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 HSPE1P28-201ENST00000443139 211 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AC068724.1-201ENST00000487100 792 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AC006483.1-201ENST00000487308 313 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 DUXAP2-201ENST00000519198 589 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AP003049.1-201ENST00000529418 457 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AP005205.1-201ENST00000563503 508 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 ZNF415P1-201ENST00000582279 1166 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AC106791.2-201ENST00000604680 391 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AP000238.1-201ENST00000608759 426 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AC092954.1-201ENST00000609121 445 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 VN1R7P-201ENST00000619242 903 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 U6.105-201ENST00000637379 88 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 MAPK10-362ENST00000641864 4484 ntBASIC3.22□□□□□ -1.89
LRRC40Q9H9A6 AL136520.1-201ENST00000600311 1322 ntBASIC3.21□□□□□ -1.89
LRRC40Q9H9A6 MTCO1P23-201ENST00000415223 1526 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 OR1S2-201ENST00000302592 978 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 SNORD51-201ENST00000384320 80 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 MIR217-201ENST00000384817 110 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 MIR183-201ENST00000384958 110 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 ATP5F1P3-201ENST00000397213 657 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC092638.1-201ENST00000411966 1275 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC092634.6-201ENST00000418558 192 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 DPPA2P1-201ENST00000428060 556 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 HMGB3P6-201ENST00000444896 598 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AL096829.2-201ENST00000446582 742 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AL672167.3-201ENST00000465951 960 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 RPL7P5-201ENST00000471472 736 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC013828.1-201ENST00000481845 158 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC093278.1-201ENST00000494700 600 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 SNORA48.10-201ENST00000516965 160 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC113192.3-201ENST00000529152 742 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC068339.2-201ENST00000534395 618 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 MTCYBP27-201ENST00000555160 670 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 MIR4666A-201ENST00000580160 79 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AP005137.2-201ENST00000609238 400 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 MIR6798-201ENST00000612887 67 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 MIR6076-201ENST00000617521 113 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 AC090740.1-201ENST00000623193 2262 ntBASIC3.21□□□□□ -1.9
LRRC40Q9H9A6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 RNU6-492P-201ENST00000363035 104 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 RNU5B-1-201ENST00000363286 116 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 SNORA14A-201ENST00000364773 135 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 RNU6-207P-201ENST00000384137 107 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 ARF4P3-201ENST00000397387 509 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AL035405.1-201ENST00000400795 710 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms