Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.53□□□□□ -2
VCX3BQ9H321 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.53□□□□□ -2
VCX3BQ9H321 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.53□□□□□ -2
VCX3BQ9H321 BRWD1P3-201ENST00000428816 390 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 AL513175.1-201ENST00000431492 780 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.53□□□□□ -2
VCX3BQ9H321 PGBD4P3-201ENST00000440731 581 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.53□□□□□ -2
VCX3BQ9H321 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.53□□□□□ -2
VCX3BQ9H321 FAM172BP-201ENST00000487497 1089 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.53□□□□□ -2
VCX3BQ9H321 AC096751.1-202ENST00000502691 1067 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.53□□□□□ -2
VCX3BQ9H321 HMGN1P15-201ENST00000513870 295 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.53□□□□□ -2
VCX3BQ9H321 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.53□□□□□ -2
VCX3BQ9H321 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.53□□□□□ -2
VCX3BQ9H321 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.53□□□□□ -2
VCX3BQ9H321 AC087241.2-201ENST00000535801 324 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.53□□□□□ -2
VCX3BQ9H321 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.53□□□□□ -2
VCX3BQ9H321 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.53□□□□□ -2
VCX3BQ9H321 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.53□□□□□ -2
VCX3BQ9H321 RPS15AP11-201ENST00000594193 385 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 AC119501.1-201ENST00000603646 475 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.53□□□□□ -2
VCX3BQ9H321 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
VCX3BQ9H321 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2.01
VCX3BQ9H321 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VCX3BQ9H321 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VCX3BQ9H321 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC109315.1-201ENST00000584143 1347 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 SNORA6-201ENST00000384033 151 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 SNORA57.1-201ENST00000391227 145 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AL512504.1-201ENST00000415494 778 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 RPLP0P7-201ENST00000416050 667 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC006548.1-201ENST00000427470 102 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 AL359385.1-201ENST00000456509 365 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 RPL7P15-201ENST00000461190 712 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC090096.1-201ENST00000489168 390 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 HPRT1P1-201ENST00000509498 657 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC091826.1-201ENST00000514065 313 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 PRELID3BP4-201ENST00000515476 571 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 OR4V1P-201ENST00000525394 1140 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC010546.1-201ENST00000569391 485 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC009127.3-201ENST00000570531 403 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC053481.3-201ENST00000577881 843 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 MIR6840-201ENST00000611937 71 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC107905.1-201ENST00000616204 426 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 CR381572.1-201ENST00000625098 102 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 AC005336.3-201ENST00000623833 2679 ntBASIC2.52□□□□□ -2.01
VCX3BQ9H321 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.52□□□□□ -2.01
VCX3BQ9H321 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC009902.3-201ENST00000606235 2172 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC087359.1-201ENST00000508335 1740 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 MIR493-201ENST00000385254 89 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3BQ9H321 DSTNP4-201ENST00000399472 474 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 U3.37-201ENST00000408528 213 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 IFNA11P-201ENST00000446352 526 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 snoU13.22-201ENST00000459428 104 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC008427.1-201ENST00000503102 655 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 PCNAP1-201ENST00000505363 709 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 MLLT10P2-201ENST00000506434 249 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 SNORA31.21-201ENST00000517180 77 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC109329.2-201ENST00000519658 482 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 HMGB1P46-201ENST00000520062 610 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC068339.2-201ENST00000534395 618 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 TRAV28-201ENST00000557548 323 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 MIR4635-201ENST00000583759 79 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms