Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 OR8X1P-201ENST00000534542 869 ntBASIC3.39□□□□□ -1.87
SCAPERQ9BY12 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.39□□□□□ -1.87
SCAPERQ9BY12 AC004486.1-201ENST00000546846 233 ntBASIC3.39□□□□□ -1.87
SCAPERQ9BY12 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.39□□□□□ -1.87
SCAPERQ9BY12 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.39□□□□□ -1.87
SCAPERQ9BY12 AL359198.2-201ENST00000611836 194 ntBASIC3.39□□□□□ -1.87
SCAPERQ9BY12 AC048347.1-201ENST00000624621 427 ntBASIC3.39□□□□□ -1.87
SCAPERQ9BY12 AC097714.1-201ENST00000511272 1647 ntBASIC3.39□□□□□ -1.87
SCAPERQ9BY12 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SCAPERQ9BY12 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 CYCSP49-201ENST00000420810 319 ntBASIC3.38□□□□□ -1.87
SCAPERQ9BY12 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 AP000705.1-201ENST00000454567 350 ntBASIC3.38□□□□□ -1.87
SCAPERQ9BY12 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 XKRY-201ENST00000510392 1100 ntBASIC3.38□□□□□ -1.87
SCAPERQ9BY12 AC026412.2-201ENST00000512270 1075 ntBASIC3.38□□□□□ -1.87
SCAPERQ9BY12 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SCAPERQ9BY12 GABPAP-201ENST00000419271 1356 ntBASIC3.38□□□□□ -1.87
SCAPERQ9BY12 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 PHKBP1-201ENST00000450951 1951 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 RNU2-2P-201ENST00000410396 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 RPL31P45-201ENST00000419532 356 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 AC008571.1-201ENST00000467232 300 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 AC072039.1-201ENST00000477611 581 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 AC068339.2-201ENST00000534395 618 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 MIR4498-201ENST00000577599 66 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.15-201ENST00000611544 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.16-201ENST00000613119 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.12-201ENST00000613778 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.20-201ENST00000613956 192 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.9-201ENST00000615427 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.11-201ENST00000616345 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.2-201ENST00000616535 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.3-201ENST00000617785 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.19-201ENST00000618602 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 RNU2-1-201ENST00000618664 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.6-201ENST00000619225 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.5-201ENST00000619465 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 U2.10-201ENST00000620268 191 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 AC010297.1-201ENST00000623948 149 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 API5P2-201ENST00000397055 1498 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.37□□□□□ -1.87
SCAPERQ9BY12 MTND5P28-201ENST00000438005 1594 ntBASIC3.37□□□□□ -1.87
SCAPERQ9BY12 RNU1-17P-201ENST00000363022 152 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 Y_RNA.595-201ENST00000410403 105 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 RAD23BP2-201ENST00000416003 1207 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 MTND2P16-201ENST00000419987 799 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.36□□□□□ -1.87
SCAPERQ9BY12 UBE2V2P4-201ENST00000447495 259 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 VN1R48P-201ENST00000448149 1036 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.36□□□□□ -1.87
SCAPERQ9BY12 SCARNA17.1-201ENST00000516211 143 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 SCARNA17.2-201ENST00000516334 143 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 BNIP3P8-201ENST00000597863 560 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 AL022099.1-201ENST00000604551 712 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 CR589904.2-201ENST00000612533 440 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 SCARNA17.4-201ENST00000614296 143 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.36□□□□□ -1.87
SCAPERQ9BY12 AC007256.1-201ENST00000392253 2765 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 ZNF355P-201ENST00000427301 3216 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SCAPERQ9BY12 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SCAPERQ9BY12 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SCAPERQ9BY12 SNORA11.4-201ENST00000408823 129 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 AL592045.1-201ENST00000429867 352 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.36□□□□□ -1.87
SCAPERQ9BY12 RN7SKP210-201ENST00000459176 261 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.36□□□□□ -1.87
SCAPERQ9BY12 AC105137.2-201ENST00000569073 466 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 AC012182.1-201ENST00000570133 895 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 AC103710.1-201ENST00000610003 901 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 AC010378.1-201ENST00000619270 362 ntBASIC3.36□□□□□ -1.87
SCAPERQ9BY12 MTND5P12-201ENST00000502851 1449 ntBASIC3.35□□□□□ -1.87
SCAPERQ9BY12 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SCAPERQ9BY12 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SCAPERQ9BY12 AC004866.2-201ENST00000438285 481 ntBASIC3.35□□□□□ -1.87
SCAPERQ9BY12 AC087190.1-201ENST00000484462 480 ntBASIC3.35□□□□□ -1.87
SCAPERQ9BY12 RNU6-964P-201ENST00000516524 69 ntBASIC3.35□□□□□ -1.87
SCAPERQ9BY12 SCARNA16.3-201ENST00000516595 184 ntBASIC3.35□□□□□ -1.87
SCAPERQ9BY12 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.35□□□□□ -1.87
SCAPERQ9BY12 TPMTP1-201ENST00000592307 737 ntBASIC3.35□□□□□ -1.87
SCAPERQ9BY12 AC011494.1-201ENST00000596454 237 ntBASIC3.35□□□□□ -1.87
SCAPERQ9BY12 AL451074.6-201ENST00000608512 729 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms