Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 HLFP1-201ENST00000402375 499 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 RNU2-41P-201ENST00000410991 178 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AL109913.1-201ENST00000421173 514 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC093698.1-201ENST00000423843 571 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC006946.1-201ENST00000429106 328 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AL513175.1-201ENST00000431492 780 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC092809.1-201ENST00000441469 474 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 MTCO1P48-201ENST00000448024 1096 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC239809.1-201ENST00000450470 217 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 ARPC3P2-201ENST00000457786 533 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 VN1R105P-201ENST00000486595 910 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC108078.3-201ENST00000502633 489 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC068446.3-201ENST00000555285 382 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC091489.2-201ENST00000566263 604 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC087499.8-201ENST00000578406 226 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 HMGB1P50-201ENST00000605814 607 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC008945.2-201ENST00000606056 604 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 RNU1-30P-201ENST00000606575 163 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AP001330.5-201ENST00000607176 411 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC107214.2-201ENST00000608204 634 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC055764.2-201ENST00000610089 670 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 MIR486-1-201ENST00000612171 68 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 FAM91A3P-201ENST00000456826 2544 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 Y_RNA.9-201ENST00000362354 101 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 RNU6-433P-201ENST00000363216 104 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 OR52E6-202ENST00000379946 954 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 RPL23AP47-201ENST00000408017 460 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 MIR1303-201ENST00000408625 86 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 RN7SKP285-201ENST00000410137 318 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 RNU6-248P-201ENST00000410720 107 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC138393.2-201ENST00000414742 246 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC245054.1-201ENST00000420944 258 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 USP12PX-201ENST00000432383 1057 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 PDSS1P2-201ENST00000449397 678 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 RPL7P31-201ENST00000450192 724 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AL033528.1-201ENST00000453780 140 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC146507.1-201ENST00000468335 354 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC034236.1-201ENST00000469891 373 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 TRBV12-2-201ENST00000489763 344 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC011352.3-201ENST00000505162 593 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 MTCO1P30-201ENST00000515244 580 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 RNU6-1261P-201ENST00000517194 104 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 MIR548AB-201ENST00000584917 84 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 VN1R79P-201ENST00000593540 513 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 VN1R85P-201ENST00000601587 426 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC069304.2-201ENST00000605154 435 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC104458.1-201ENST00000608243 463 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AL139089.1-201ENST00000620372 975 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AC124864.2-201ENST00000624736 186 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 AL445437.1-201ENST00000623157 3087 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 MTND4P23-201ENST00000447723 1363 ntBASIC4.68□□□□□ -1.66
SALL3Q9BXA9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 RNU1-18P-201ENST00000363062 164 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 SNORA72.1-201ENST00000363485 129 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 RNU5F-7P-201ENST00000363696 115 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms