Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 ATG12P2-201ENST00000456830 416 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 MTCO3P2-201ENST00000457365 171 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 U3.44-201ENST00000458938 192 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 RPL37P6-202ENST00000464216 403 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC013828.1-201ENST00000481845 158 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 RPL7P38-201ENST00000488396 739 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC005726.1-201ENST00000494679 427 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 RNU6-1129P-201ENST00000515964 104 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 RN7SKP234-201ENST00000517173 224 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 MTND2P26-201ENST00000528255 1029 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC125611.1-201ENST00000549563 229 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC005951.1-201ENST00000576706 485 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 MAGOH2P-202ENST00000584384 429 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC067852.3-201ENST00000589177 561 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC104785.1-201ENST00000603220 588 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC069304.2-201ENST00000605154 435 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC131235.4-201ENST00000609288 620 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC068722.2-201ENST00000618734 544 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC131159.1-201ENST00000621854 213 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC120349.2-201ENST00000625002 298 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AC116618.1-201ENST00000634617 774 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 AL390862.1-201ENST00000635467 1469 ntBASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC28BQ9BUN5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 MTND5P3-201ENST00000438536 1800 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AL353743.1-202ENST00000431724 1695 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 ZNF37BP-203ENST00000452306 1352 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AL122126.1-201ENST00000546905 1318 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 RNU1-85P-201ENST00000364127 164 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 RPL32P23-201ENST00000397237 405 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 RNU6-757P-201ENST00000410334 100 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC068533.2-201ENST00000411872 306 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 RAP1BP1-201ENST00000412709 553 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC004987.3-201ENST00000413879 771 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 Z99755.1-201ENST00000414048 380 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 TIMM9P2-201ENST00000419324 266 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AL353705.1-201ENST00000433468 480 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 MTATP6P26-201ENST00000445926 662 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 MTCYBP11-201ENST00000447254 1109 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC010301.1-201ENST00000473936 355 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 RPS26P21-201ENST00000475397 348 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC104057.1-201ENST00000515547 497 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC007991.1-201ENST00000522680 631 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 SLC2A13P1-201ENST00000531560 322 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 MIR4504-201ENST00000577413 92 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC107982.3-201ENST00000584957 985 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AL031281.1-201ENST00000604049 488 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC004832.5-201ENST00000608677 401 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AL360219.1-201ENST00000610230 366 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
CCDC28BQ9BUN5 FAM157B-203ENST00000639350 358 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms