Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AP002826.1-201ENST00000608835 315 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AL445567.2-201ENST00000618935 498 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AF246928.1-201ENST00000623768 87 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC092192.1-201ENST00000633154 1018 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AP002001.2-201ENST00000529025 1469 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC092326.2-201ENST00000624772 1561 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC009812.4-201ENST00000569134 1805 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC011460.1-201ENST00000636268 1834 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 MIR383-201ENST00000362257 73 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 RNU6-769P-201ENST00000384407 104 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 SNORA70C-201ENST00000384538 135 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 RN7SKP182-201ENST00000410772 298 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 RNU6-516P-201ENST00000411381 104 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 JKAMPP1-201ENST00000413804 919 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 CYP4F29P-201ENST00000420685 446 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AL445669.1-201ENST00000426743 755 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 COX6B1P7-201ENST00000430845 235 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 RPL21P133-201ENST00000443666 476 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 RPL7P36-201ENST00000444633 681 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 NUTF2P3-201ENST00000448540 384 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 ANP32BP2-201ENST00000454525 545 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 RPS23P3-201ENST00000470993 430 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC105137.1-201ENST00000484355 562 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AP000563.1-201ENST00000490865 758 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC108475.1-201ENST00000507880 950 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 CBX3P3-201ENST00000508108 532 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 KCTD9P2-201ENST00000512203 1013 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC099522.1-202ENST00000514718 367 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 MRPL49P2-201ENST00000521066 465 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AP003730.1-201ENST00000524605 285 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC125611.2-201ENST00000551907 647 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 TVP23BP1-201ENST00000557500 617 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC243312.2-201ENST00000623340 601 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC091965.5-201ENST00000624785 342 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AP005264.7-201ENST00000625003 745 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 AC244258.1-201ENST00000637553 1071 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 OR52H1-202ENST00000641796 1061 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 OTUD4P1-201ENST00000237841 3067 ntBASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HERPUD2Q9BSE4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC006378.2-201ENST00000623178 2476 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC009902.3-201ENST00000606235 2172 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 RNU6-553P-201ENST00000364047 96 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 RNU6-501P-201ENST00000364072 100 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 RN7SKP227-201ENST00000364445 330 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 RPS26P8-201ENST00000393490 348 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 MTND1P21-201ENST00000412991 285 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC109780.2-201ENST00000413467 845 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 MTND2P18-201ENST00000419962 1030 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 USP9YP26-201ENST00000421008 661 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 RPL23AP38-201ENST00000423801 469 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 OR8F1P-201ENST00000425243 930 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AL512649.1-201ENST00000428997 581 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 BTF3P10-201ENST00000433415 495 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 GSTA7P-201ENST00000438425 448 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 OR2A20P-203ENST00000498397 1268 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC005178.1-201ENST00000508392 440 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 SNORA70.14-201ENST00000516205 110 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 RNU6-759P-201ENST00000516740 103 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms