Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 U3.7-201ENST00000363668 216 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-339P-201ENST00000384310 107 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AL359643.1-201ENST00000404109 423 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 MIR1250-201ENST00000408098 113 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 OR6E1P-201ENST00000414424 923 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 Z93019.1-201ENST00000416450 973 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AL359265.2-201ENST00000434367 631 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 RPL12P46-201ENST00000436610 195 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 RPL23AP43-201ENST00000446445 471 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC090804.1-201ENST00000448870 490 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 RPS17P13-201ENST00000448974 407 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AL118520.1-201ENST00000450770 291 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 BTF3P15-201ENST00000455606 336 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 ELOCP24-201ENST00000456370 334 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC079168.1-201ENST00000458741 345 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 RPS26P39-201ENST00000469206 341 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 MTCYBP40-201ENST00000509390 1135 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC016559.2-201ENST00000510759 359 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 ATP5LP3-201ENST00000514223 304 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-27P-201ENST00000516146 107 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-1088P-201ENST00000516850 104 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AP004607.2-201ENST00000533949 322 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AL118558.2-201ENST00000556294 238 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AL133153.1-201ENST00000557756 303 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC012616.1-201ENST00000600294 197 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC104687.2-201ENST00000604442 342 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AL451044.1-201ENST00000604867 238 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AL390240.1-201ENST00000612950 384 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 MIR6826-201ENST00000617808 98 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC091925.2-201ENST00000625059 256 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 MIR4496-201ENST00000635896 61 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC119674.1-207ENST00000641355 633 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 OR52H1-202ENST00000641796 1061 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AC244517.1-201ENST00000606030 2086 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 PABPC1P7-201ENST00000413177 1513 ntBASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM56Q9BRZ2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM56Q9BRZ2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM56Q9BRZ2 FAM91A3P-201ENST00000456826 2544 ntBASIC5.46□□□□□ -1.53
TRIM56Q9BRZ2 AC116667.1-201ENST00000604855 2072 ntBASIC5.46□□□□□ -1.53
TRIM56Q9BRZ2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM56Q9BRZ2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 Y_RNA.378-201ENST00000365652 113 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 RNA5SP241-201ENST00000391326 114 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-1304P-201ENST00000411374 106 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 BX510359.3-201ENST00000422168 306 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 MTCYBP10-201ENST00000424905 650 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 MTCYBP9-201ENST00000431021 303 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 FABP5P14-201ENST00000437273 393 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 RPL36AP39-201ENST00000445859 318 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC087385.1-201ENST00000475062 312 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC106872.2-201ENST00000494303 480 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 RN7SKP277-201ENST00000516895 283 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms