Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC008083.2-201ENST00000546707 476 ntBASIC3.6□□□□□ -1.83
IFT140Q96RY7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.6□□□□□ -1.83
IFT140Q96RY7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
IFT140Q96RY7 AC090229.1-201ENST00000590983 1609 ntBASIC3.59□□□□□ -1.83
IFT140Q96RY7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
IFT140Q96RY7 PHKBP1-201ENST00000450951 1951 ntBASIC3.59□□□□□ -1.83
IFT140Q96RY7 OR10AB1P-202ENST00000641219 1686 ntBASIC3.59□□□□□ -1.83
IFT140Q96RY7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.59□□□□□ -1.84
IFT140Q96RY7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.59□□□□□ -1.84
IFT140Q96RY7 AL138787.1-202ENST00000437804 898 ntBASIC3.59□□□□□ -1.84
IFT140Q96RY7 AC107294.3-201ENST00000609211 526 ntBASIC3.59□□□□□ -1.84
IFT140Q96RY7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
IFT140Q96RY7 AP006248.2-201ENST00000623309 592 ntBASIC3.59□□□□□ -1.84
IFT140Q96RY7 AC002064.3-201ENST00000623448 346 ntBASIC3.59□□□□□ -1.84
IFT140Q96RY7 AL161431.1-201ENST00000618966 4205 ntBASIC3.59□□□□□ -1.84
IFT140Q96RY7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
IFT140Q96RY7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
IFT140Q96RY7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IFT140Q96RY7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IFT140Q96RY7 AL009174.1-201ENST00000426577 416 ntBASIC3.58□□□□□ -1.84
IFT140Q96RY7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.58□□□□□ -1.84
IFT140Q96RY7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.58□□□□□ -1.84
IFT140Q96RY7 POU5F1P7-201ENST00000508759 541 ntBASIC3.58□□□□□ -1.84
IFT140Q96RY7 RNU6-1334P-201ENST00000516032 105 ntBASIC3.58□□□□□ -1.84
IFT140Q96RY7 AL359821.1-201ENST00000605519 182 ntBASIC3.58□□□□□ -1.84
IFT140Q96RY7 AL451074.6-201ENST00000608512 729 ntBASIC3.58□□□□□ -1.84
IFT140Q96RY7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
IFT140Q96RY7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IFT140Q96RY7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.58□□□□□ -1.84
IFT140Q96RY7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
IFT140Q96RY7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.58□□□□□ -1.84
IFT140Q96RY7 AL136964.1-201ENST00000622038 2990 ntBASIC3.57□□□□□ -1.84
IFT140Q96RY7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
IFT140Q96RY7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.57□□□□□ -1.84
IFT140Q96RY7 MIR378A-201ENST00000362177 66 ntBASIC3.57□□□□□ -1.84
IFT140Q96RY7 AC012498.1-201ENST00000424037 437 ntBASIC3.57□□□□□ -1.84
IFT140Q96RY7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.57□□□□□ -1.84
IFT140Q96RY7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
IFT140Q96RY7 AC135999.1-201ENST00000478962 479 ntBASIC3.57□□□□□ -1.84
IFT140Q96RY7 RN7SL283P-201ENST00000489055 303 ntBASIC3.57□□□□□ -1.84
IFT140Q96RY7 HIGD1AP10-201ENST00000527837 282 ntBASIC3.57□□□□□ -1.84
IFT140Q96RY7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.57□□□□□ -1.84
IFT140Q96RY7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
IFT140Q96RY7 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.56□□□□□ -1.84
IFT140Q96RY7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
IFT140Q96RY7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
IFT140Q96RY7 Y_RNA.116-201ENST00000363292 103 ntBASIC3.56□□□□□ -1.84
IFT140Q96RY7 SNORA51.4-201ENST00000364993 124 ntBASIC3.56□□□□□ -1.84
IFT140Q96RY7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.56□□□□□ -1.84
IFT140Q96RY7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.56□□□□□ -1.84
IFT140Q96RY7 TRAV31-201ENST00000502780 342 ntBASIC3.56□□□□□ -1.84
IFT140Q96RY7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.56□□□□□ -1.84
IFT140Q96RY7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
IFT140Q96RY7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.56□□□□□ -1.84
IFT140Q96RY7 AC068446.3-201ENST00000555285 382 ntBASIC3.56□□□□□ -1.84
IFT140Q96RY7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.56□□□□□ -1.84
IFT140Q96RY7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.56□□□□□ -1.84
IFT140Q96RY7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.56□□□□□ -1.84
IFT140Q96RY7 MIR21-201ENST00000362134 72 ntBASIC3.55□□□□□ -1.84
IFT140Q96RY7 GSTA12P-201ENST00000402398 508 ntBASIC3.55□□□□□ -1.84
IFT140Q96RY7 NCSTNP1-201ENST00000406229 144 ntBASIC3.55□□□□□ -1.84
IFT140Q96RY7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.55□□□□□ -1.84
IFT140Q96RY7 AC108078.2-201ENST00000510750 236 ntBASIC3.55□□□□□ -1.84
IFT140Q96RY7 RNA5SP76-201ENST00000516277 87 ntBASIC3.55□□□□□ -1.84
IFT140Q96RY7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.55□□□□□ -1.84
IFT140Q96RY7 AP003467.2-201ENST00000520175 319 ntBASIC3.55□□□□□ -1.84
IFT140Q96RY7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.55□□□□□ -1.84
IFT140Q96RY7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.55□□□□□ -1.84
IFT140Q96RY7 MTND5P27-201ENST00000428871 1720 ntBASIC3.55□□□□□ -1.84
IFT140Q96RY7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
IFT140Q96RY7 AL445437.1-201ENST00000623157 3087 ntBASIC3.55□□□□□ -1.84
IFT140Q96RY7 MAPK10-322ENST00000641485 4530 ntBASIC3.55□□□□□ -1.84
IFT140Q96RY7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
IFT140Q96RY7 RNU6-457P-201ENST00000363999 107 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 SNORA48.3-201ENST00000391081 134 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 FGF7P8-201ENST00000402994 292 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.54□□□□□ -1.84
IFT140Q96RY7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.54□□□□□ -1.84
IFT140Q96RY7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.54□□□□□ -1.84
IFT140Q96RY7 OR52A4P-203ENST00000498233 1014 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 RN7SKP82-201ENST00000516786 223 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
IFT140Q96RY7 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC099778.2-201ENST00000610904 211 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC069234.5-201ENST00000611056 416 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
IFT140Q96RY7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
IFT140Q96RY7 MIR337-201ENST00000362281 93 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 MIR518E-201ENST00000385252 88 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 HMGB1P11-201ENST00000413899 637 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC009302.1-201ENST00000417147 390 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.54□□□□□ -1.84
IFT140Q96RY7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC011611.5-201ENST00000552477 578 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC110588.1-201ENST00000559699 137 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC006116.7-201ENST00000590141 756 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 AC108479.2-201ENST00000617314 601 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms