Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 SNORA51.6-201ENST00000384151 125 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 MIR649-201ENST00000384843 97 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 MIR298-201ENST00000401212 88 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC012065.2-201ENST00000421295 375 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 RPL36P19-201ENST00000430744 301 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AL049734.2-201ENST00000441066 616 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC114495.1-201ENST00000441274 436 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 IPO7P1-201ENST00000442031 636 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 RN7SL441P-201ENST00000492388 296 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC020593.1-201ENST00000507399 299 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-273P-201ENST00000516937 96 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 OR5B10P-201ENST00000532869 642 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC009852.2-201ENST00000567898 485 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC022884.2-201ENST00000578535 580 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC006006.1-201ENST00000603082 144 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AC124303.1-201ENST00000605703 360 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AL627309.6-201ENST00000606857 840 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC073136.1-201ENST00000449426 2884 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC005005.4-201ENST00000623789 16698 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC134882.1-201ENST00000603738 1676 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 RNU4-66P-201ENST00000365199 138 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-729P-201ENST00000384399 107 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 DSTNP4-201ENST00000399472 474 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 MTCYBP4-201ENST00000401524 249 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AL356057.3-201ENST00000402607 340 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 HSPE1P1-201ENST00000421494 318 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 Z82205.1-201ENST00000428456 297 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 NRBF2P3-201ENST00000432731 865 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 DDX3P2-201ENST00000446138 111 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AL133244.1-201ENST00000456007 258 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 RPS4XP10-201ENST00000465034 731 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 RPL21P99-201ENST00000480369 423 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 NIP7P2-201ENST00000485801 544 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AP002812.1-201ENST00000495378 474 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 ENPP7P9-201ENST00000514456 627 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 RN7SKP276-201ENST00000516242 268 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 Y_RNA.711-201ENST00000516993 102 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC012339.2-201ENST00000523996 453 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AP001880.2-201ENST00000538233 448 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC006349.1-201ENST00000555526 235 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC068790.3-201ENST00000602988 553 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC004908.2-201ENST00000609090 574 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 OR6R2P-201ENST00000609216 300 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC090425.1-201ENST00000610007 140 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC130324.3-201ENST00000614165 542 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 CR392039.4-201ENST00000624968 501 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 OR52H1-202ENST00000641796 1061 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC107081.3-201ENST00000612715 2034 ntBASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNGAP1Q96PV0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms