Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 RNU6-853P-201ENST00000364306 107 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 RNU6-339P-201ENST00000384310 107 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 Y_RNA.517-201ENST00000384551 106 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 MIR183-201ENST00000384958 110 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 RNU6-648P-201ENST00000410190 107 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 Y_RNA.598-201ENST00000410480 95 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 RPS12P5-201ENST00000423449 371 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 RWDD4P2-201ENST00000426392 563 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AL356583.2-201ENST00000426536 280 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 HMGN2P31-201ENST00000432430 273 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 RPL7P52-201ENST00000449200 742 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AL590365.1-201ENST00000450788 243 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 snoU13.8-201ENST00000458890 104 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AP001992.1-205ENST00000462248 379 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AC023424.2-201ENST00000493479 777 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 RN7SL323P-201ENST00000494712 295 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AC112204.1-201ENST00000502591 103 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 RNU6-405P-201ENST00000516637 110 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AC022880.1-201ENST00000534017 973 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 ZNF415P1-201ENST00000582279 1166 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 HMGB2P1-201ENST00000591146 634 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AC105429.2-201ENST00000610567 517 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 MIR6868-201ENST00000611215 58 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AL442067.2-201ENST00000614033 363 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AC108479.2-201ENST00000617314 601 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 AL139089.1-201ENST00000620372 975 ntBASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AP002001.2-201ENST00000529025 1469 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AL049780.3-201ENST00000624612 1583 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 MIR708-201ENST00000390708 88 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 SNORA40.3-201ENST00000390964 122 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 SNORD66.1-201ENST00000391230 76 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AL356421.1-201ENST00000403255 413 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AL359643.1-201ENST00000404109 423 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 MIR1911-201ENST00000410783 80 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 USP9YP13-201ENST00000417797 480 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AC007742.1-201ENST00000425789 329 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 OR5BE1P-201ENST00000425977 939 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AL445669.1-201ENST00000426743 755 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 ELOCP26-201ENST00000436067 329 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 RPS4XP4-201ENST00000443195 763 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 Z82190.1-201ENST00000454534 490 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 MTCO1P42-201ENST00000457379 726 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 snoU109.1-201ENST00000459339 135 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AC109464.2-201ENST00000510242 943 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AP003392.2-201ENST00000527269 208 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 MTND1P15-201ENST00000579262 949 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 DEFB131E-202ENST00000602581 683 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AC080078.2-201ENST00000603766 501 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AC112191.3-201ENST00000604371 277 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AL158196.1-201ENST00000616786 434 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AC015914.2-201ENST00000618167 288 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 OR5BE1P-202ENST00000641168 1176 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 AC092447.10-201ENST00000620607 1652 ntBASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM43Q96BQ3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms