Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC007546.2-201ENST00000623996 360 ntBASIC5□□□□□ -1.61
ERCC4Q92889 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ERCC4Q92889 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5□□□□□ -1.61
ERCC4Q92889 SPATA31D2P-201ENST00000429999 4388 ntBASIC5□□□□□ -1.61
ERCC4Q92889 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ERCC4Q92889 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ERCC4Q92889 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC4Q92889 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ERCC4Q92889 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC4Q92889 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC4Q92889 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC4Q92889 Y_RNA.1-201ENST00000352915 104 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 RNU6-1090P-201ENST00000364065 94 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 RNU6-534P-201ENST00000364877 106 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ERCC4Q92889 RNU6-1279P-201ENST00000383917 103 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 RNU6-1226P-201ENST00000384317 107 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 AC004552.1-201ENST00000419089 348 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 AL139413.1-201ENST00000421309 217 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.99□□□□□ -1.61
ERCC4Q92889 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.99□□□□□ -1.61
ERCC4Q92889 RPL23AP25-201ENST00000430973 463 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 ARPC3P1-201ENST00000437218 533 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 RPL22P17-201ENST00000438729 315 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 DPPA3P1-201ENST00000448050 469 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 HMGB3P21-201ENST00000452483 547 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 IFNWP4-201ENST00000453148 294 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.99□□□□□ -1.61
ERCC4Q92889 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.99□□□□□ -1.61
ERCC4Q92889 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.99□□□□□ -1.61
ERCC4Q92889 RPS26P3-201ENST00000470205 348 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.99□□□□□ -1.61
ERCC4Q92889 AC090543.2-201ENST00000483963 348 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 AC004057.1-201ENST00000485827 348 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 AC034222.1-201ENST00000494052 532 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 MTCYBP18-201ENST00000501056 747 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.99□□□□□ -1.61
ERCC4Q92889 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.99□□□□□ -1.61
ERCC4Q92889 AC093677.1-201ENST00000514414 678 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.99□□□□□ -1.61
ERCC4Q92889 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
ERCC4Q92889 RNU6-358P-201ENST00000516564 75 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.99□□□□□ -1.61
ERCC4Q92889 AC109635.3-201ENST00000529536 185 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC4Q92889 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.99□□□□□ -1.61
ERCC4Q92889 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.99□□□□□ -1.61
ERCC4Q92889 AL391646.1-201ENST00000603860 190 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 AC007363.1-201ENST00000604736 620 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 AL390208.1-201ENST00000605885 644 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 MIR6891-201ENST00000618788 93 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ERCC4Q92889 AL732618.1-201ENST00000623251 301 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 AC091905.1-201ENST00000624400 311 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 CYP3A51P-201ENST00000633513 256 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 MIR1321-201ENST00000637766 79 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ERCC4Q92889 AC138915.3-201ENST00000562908 1389 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ERCC4Q92889 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC4Q92889 AC092447.10-201ENST00000620607 1652 ntBASIC4.99□□□□□ -1.61
ERCC4Q92889 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ERCC4Q92889 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.98□□□□□ -1.61
ERCC4Q92889 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ERCC4Q92889 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
ERCC4Q92889 AC008033.1-201ENST00000216407 1162 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 RNA5SP52-201ENST00000362448 134 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 Y_RNA.89-201ENST00000363031 102 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC4Q92889 RN7SKP285-201ENST00000410137 318 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 RNU2-41P-201ENST00000410991 178 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AC078974.1-201ENST00000411597 223 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AL139095.3-201ENST00000419672 1203 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.98□□□□□ -1.61
ERCC4Q92889 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.98□□□□□ -1.61
ERCC4Q92889 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
ERCC4Q92889 HSPE1P28-201ENST00000443139 211 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 snoU13.7-201ENST00000459220 104 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.98□□□□□ -1.61
ERCC4Q92889 AP001025.2-201ENST00000490908 477 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AC006499.6-201ENST00000511169 607 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.98□□□□□ -1.61
ERCC4Q92889 RNU6-714P-201ENST00000516963 103 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 IGKV1-32-201ENST00000519290 311 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 IGLVIV-53-201ENST00000520107 367 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AC022616.6-201ENST00000520479 119 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.98□□□□□ -1.61
ERCC4Q92889 AP001781.1-201ENST00000530977 207 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AP003034.1-201ENST00000534621 422 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC4Q92889 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.98□□□□□ -1.61
ERCC4Q92889 AC135001.1-201ENST00000544546 283 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AL512310.1-201ENST00000548639 172 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AC091042.1-201ENST00000579213 173 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AC090616.5-202ENST00000582111 297 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.98□□□□□ -1.61
ERCC4Q92889 AC068790.5-201ENST00000602741 355 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC4Q92889 OR6R2P-201ENST00000609216 300 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms